chr13 : 106,381,147 – 106,381,811
664 bp 84 TFs 0 linked genes
This 664 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:106,376,147 – 106,386,811
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP GSE148358.AR.VCaP 148 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 273 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 132 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 277 bp overlap
BARX1 2 datasets
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
Motif DE_72h DE_72h-BARX1_MA0875.2 6 bp overlap
BARX2 2 datasets
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
BCL6 3 datasets
Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
Motif DE_72h DE_72h-BCL6_MA0463.3 13 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 141 bp overlap
BSX 2 datasets
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
Motif DE_72h DE_72h-BSX_MA0876.2 6 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 151 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 220 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 96 bp overlap
DLX1 2 datasets
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
Motif DE_72h DE_72h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Motif DE_72h DE_72h-DLX6_MA0882.2 6 bp overlap
Dlx3 2 datasets
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Motif DE_72h DE_72h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
Motif DE_72h DE_72h-Dlx4_MA0881.2 6 bp overlap
EBF1 1 dataset
Motif DE_60h DE_60h-EBF1_MA0154.5 11 bp overlap
ERG 3 datasets
ChIP VCaP GSE28950.ERG.VCaP 237 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 425 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 191 bp overlap
Ebf4 1 dataset
Motif DE_60h DE_60h-Ebf4_MA2122.1 11 bp overlap
FOXA1 2 datasets
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 185 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 535 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 391 bp overlap
ChIP DE DE-FOXA2-1 619 bp overlap
ChIP DE DE-FOXA2-2 611 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 575 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 273 bp overlap
ChIP DE DE-GATA4-1 493 bp overlap
ChIP DE DE-GATA4-2 587 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 455 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 547 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 548 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 21 datasets
ChIP AGS GSE51705.GATA6.AGS 263 bp overlap
ChIP AGS GSE51936.GATA6.AGS 85 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 119 bp overlap
ChIP DE DE-GATA6-1 611 bp overlap
ChIP DE DE-GATA6-2 584 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 372 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 262 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 514 bp overlap
ChIP H9 ERP004206.GATA6.H9 232 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 410 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 335 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 211 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 403 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 411 bp overlap
ChIP foregut GSE117136.GATA6.foregut 488 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 406 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 461 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 523 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 523 bp overlap
GBX2 2 datasets
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
Motif DE_72h DE_72h-GBX2_MA0890.2 6 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Gfi1B 2 datasets
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HESX1 2 datasets
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
Motif DE_72h DE_72h-HESX1_MA0894.2 6 bp overlap
HIC2 1 dataset
Motif DE_60h DE_60h-HIC2_MA0738.2 6 bp overlap
HNF1A 2 datasets
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 173 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 89 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 212 bp overlap
HOXA7 2 datasets
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
Motif DE_72h DE_72h-HOXA7_MA1498.3 6 bp overlap
HOXC13 2 datasets
Motif DE_60h DE_60h-HOXC13_MA0907.2 9 bp overlap
Motif DE_72h DE_72h-HOXC13_MA0907.2 9 bp overlap
ISL2 1 dataset
Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 264 bp overlap
KLF13 2 datasets
Motif DE_60h DE_60h-KLF13_MA0657.2 17 bp overlap
Motif DE_72h DE_72h-KLF13_MA0657.2 17 bp overlap
KLF5 3 datasets
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 172 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 168 bp overlap
LBX2 2 datasets
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
Motif DE_72h DE_72h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
Motif DE_72h DE_72h-LHX2_MA0700.3 6 bp overlap
MAZ 1 dataset
Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap
MSX1 2 datasets
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
Motif DE_72h DE_72h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
Motif DE_72h DE_72h-MSX2_MA0708.3 6 bp overlap
MYB 4 datasets
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
Motif DE_72h DE_72h-MYB_MA0100.4 6 bp overlap
Msx3 2 datasets
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
Motif DE_72h DE_72h-Msx3_MA0709.2 6 bp overlap
NKX2-3 1 dataset
Motif DE_60h DE_60h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_60h DE_60h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_60h DE_60h-NKX2-8_MA0673.2 8 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 303 bp overlap
Nkx3-1 1 dataset
Motif DE_60h DE_60h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_60h DE_60h-Nkx3-2_MA0122.4 10 bp overlap
Nobox 2 datasets
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
Motif DE_72h DE_72h-Nobox_MA0125.2 6 bp overlap
PATZ1 1 dataset
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 222 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 499 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 166 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 93 bp overlap
RAX 2 datasets
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
Motif DE_72h DE_72h-RAX_MA0718.2 6 bp overlap
RBPJ 2 datasets
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 169 bp overlap
RUNX3 2 datasets
Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 454 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 199 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 224 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 124 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 270 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap
SOX18 2 datasets
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
Motif DE_72h DE_72h-SOX18_MA1563.2 8 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 254 bp overlap
SP4 1 dataset
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SRY 2 datasets
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
Motif DE_72h DE_72h-SRY_MA0084.2 7 bp overlap
STAT1 3 datasets
Motif DE_48h DE_48h-STAT1_MA0137.4 9 bp overlap
Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap
Motif DE_72h DE_72h-STAT1_MA0137.4 9 bp overlap
Sox1 2 datasets
Motif DE_60h DE_60h-Sox1_MA0870.1 15 bp overlap
Motif DE_72h DE_72h-Sox1_MA0870.1 15 bp overlap
Stat5a 3 datasets
Motif DE_48h DE_48h-Stat5a_MA1624.2 9 bp overlap
Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap
Motif DE_72h DE_72h-Stat5a_MA1624.2 9 bp overlap
TEAD1 5 datasets
Motif DE_48h DE_48h-TEAD1_MA0090.4 9 bp overlap
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 244 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 251 bp overlap
TEAD2 3 datasets
Motif DE_48h DE_48h-TEAD2_MA1121.2 7 bp overlap
Motif DE_60h DE_60h-TEAD2_MA1121.2 7 bp overlap
Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap
TEAD3 3 datasets
Motif DE_48h DE_48h-TEAD3_MA0808.1 8 bp overlap
Motif DE_60h DE_60h-TEAD3_MA0808.1 8 bp overlap
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TEAD4 5 datasets
Motif DE_48h DE_48h-TEAD4_MA0809.3 8 bp overlap
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 166 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZFP14 2 datasets
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 368 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 289 bp overlap
ZNF148 1 dataset
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
ZNF682 2 datasets
Motif DE_60h DE_60h-ZNF682_MA1599.2 11 bp overlap
Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap
ZNF766 2 datasets
Motif DE_60h DE_60h-ZNF766_MA2098.1 9 bp overlap
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
ZSCAN16 2 datasets
ChIP HEK293 GSE76494.ZSCAN16.HEK293 122 bp overlap
ChIP HEK293 GSE76494.ZSCAN16.HEK293 170 bp overlap
ZSCAN31 2 datasets
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_72h DE_72h-ZSCAN31_MA1722.2 18 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
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