chr13 : 105,047,449 – 105,048,255

806 bp 80 TFs 0 linked genes

This 806 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

80 transcription factors

AR 5 datasets

ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 174 bp overlap

ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 225 bp overlap

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 194 bp overlap

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 269 bp overlap

ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 191 bp overlap

ATF2 1 dataset

Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap

Atf3 1 dataset

Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap

BACH1 1 dataset

Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap

BARX2 1 dataset

Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap

BATF 1 dataset

Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap

BRD4 2 datasets

ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 173 bp overlap

ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 258 bp overlap

CREB1 1 dataset

Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap

CTCF 1 dataset

Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap

DUX4 1 dataset

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

DUXA 1 dataset

Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap

Dux 1 dataset

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EHF 1 dataset

Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap

ELF3 1 dataset

Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 218 bp overlap

ESR1 7 datasets

ChIP T-47D GSE148277.ESR1.T-47D 506 bp overlap

ChIP T-47D ENCSR000BKN.ESR1.T-47D 255 bp overlap

ChIP T-47D ENCSR000BJS.ESR1.T-47D 297 bp overlap

ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 411 bp overlap

ChIP ZR751 ERP000783.ESR1.ZR751 594 bp overlap

ChIP ZR751 GSE72249.ESR1.ZR751 349 bp overlap

ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 301 bp overlap

ESRRA 5 datasets

ChIP BT-474 GSE81651.ESRRA.BT-474 516 bp overlap

ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 342 bp overlap

ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 490 bp overlap

Motif DE_60h DE_60h-ESRRA_MA0592.4 9 bp overlap

ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 351 bp overlap

ETV2::DRGX 1 dataset

Motif DE_60h DE_60h-ETV2DRGX_MA1940.2 12 bp overlap

ETV5::DRGX 1 dataset

Motif DE_60h DE_60h-ETV5DRGX_MA1944.2 12 bp overlap

ETV6 1 dataset

ChIP GM12878 GSE97661.ETV6.GM12878 147 bp overlap

Elf5 1 dataset

Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap

Esrrg 1 dataset

Motif DE_60h DE_60h-Esrrg_MA0643.2 9 bp overlap

FOS 1 dataset

Motif DE_60h DE_60h-FOS_MA0476.2 8 bp overlap

FOS::JUND 1 dataset

Motif DE_60h DE_60h-FOSJUND_MA1141.2 9 bp overlap

FOSL1 1 dataset

Motif DE_60h DE_60h-FOSL1_MA0477.3 9 bp overlap

FOSL1::JUN 1 dataset

Motif DE_60h DE_60h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUND 1 dataset

Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2::JUN 1 dataset

Motif DE_60h DE_60h-FOSL2JUN_MA1130.2 9 bp overlap

FOXA1 12 datasets

ChIP T-47D GSE72249.FOXA1.T-47D 254 bp overlap

ChIP T-47D_DEX GSE72249.FOXA1.T-47D_DEX 237 bp overlap

ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 247 bp overlap

ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 187 bp overlap

ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 555 bp overlap

ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 678 bp overlap

ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 547 bp overlap

ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 677 bp overlap

ChIP ZR751 GSE72249.FOXA1.ZR751 560 bp overlap

ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 406 bp overlap

ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 661 bp overlap

ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 595 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 729 bp overlap

ChIP DE DE-FOXA2-2 727 bp overlap

FOXD3 1 dataset

Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 239 bp overlap

GATA2 2 datasets

ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 189 bp overlap

ChIP LNCaP_FBS GSE69043.GATA2.LNCaP_FBS 149 bp overlap

GATA3 1 dataset

ChIP T-47D ENCSR000BMX.GATA3.T-47D 377 bp overlap

GATA3_Cter 1 dataset

ChIP T-47D_flp-ctrl GSE99479.GATA3_Cter.T-47D_flp-ctrl 298 bp overlap

GATA3_Nter 2 datasets

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 306 bp overlap

ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 437 bp overlap

GATA4 5 datasets

ChIP DE DE-GATA4-1 661 bp overlap

ChIP DE DE-GATA4-2 679 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 620 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 550 bp overlap

GATA6 6 datasets

ChIP AGS GSE51705.GATA6.AGS 155 bp overlap

ChIP DE DE-GATA6-1 581 bp overlap

ChIP DE DE-GATA6-2 626 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 317 bp overlap

ChIP foregut GSE117136.GATA6.foregut 364 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 325 bp overlap

HLF 1 dataset

Motif DE_60h DE_60h-HLF_MA0043.4 9 bp overlap

IRF2 1 dataset

Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap

Irf1 1 dataset

Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap

JUN 2 datasets

Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 363 bp overlap

JUN::JUNB 1 dataset

Motif DE_60h DE_60h-JUNJUNB_MA1132.2 8 bp overlap

JUND 2 datasets

Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap

ChIP Kasumi-1_ctrl GSE117105.JUND.Kasumi-1_ctrl 121 bp overlap

Jun 1 dataset

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MEIS2 1 dataset

Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap

MEIS3 1 dataset

Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap

NR2C1 1 dataset

Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap

NR3C1 2 datasets

ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 240 bp overlap

ChIP ZR751_DEX GSE72249.NR3C1.ZR751_DEX 294 bp overlap

NR5A1 1 dataset

Motif DE_60h DE_60h-NR5A1_MA1540.3 12 bp overlap

NR6A1 1 dataset

Motif DE_60h DE_60h-NR6A1_MA1541.2 14 bp overlap

Nr1H2 1 dataset

Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap

Nr5A2 1 dataset

Motif DE_60h DE_60h-Nr5A2_MA0505.3 9 bp overlap

PBX1 1 dataset

Motif DE_60h DE_60h-PBX1_MA0070.2 9 bp overlap

PGR 2 datasets

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 173 bp overlap

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 305 bp overlap

POU1F1 1 dataset

Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap

POU2F2 1 dataset

Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap

POU2F3 1 dataset

Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap

Prdm4 1 dataset

Motif DE_60h DE_60h-Prdm4_MA1647.3 11 bp overlap

RORA 2 datasets

Motif DE_60h DE_60h-RORA_MA0071.1 10 bp overlap

Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap

RORB 1 dataset

Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap

RORC 1 dataset

Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 388 bp overlap

SMARCA4 1 dataset

ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 293 bp overlap

SPI1 1 dataset

ChIP THP-1 GSE128834.SPI1.THP-1 115 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

TP53 1 dataset

ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 163 bp overlap

TRPS1 1 dataset

ChIP T-47D GSE107013.TRPS1.T-47D 288 bp overlap

ZNF136 1 dataset

Motif DE_60h DE_60h-ZNF136_MA1588.1 15 bp overlap

ZNF143 1 dataset

Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap

ZNF184 1 dataset

Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap

ZNF382 1 dataset

Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap

ZNF524 1 dataset

Motif DE_60h DE_60h-ZNF524_MA2096.1 9 bp overlap