chr13 : 76,758,289 76,758,694
405 bp 64 TFs 0 linked genes
This 405 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:76,753,289 – 76,763,694
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 182 bp overlap
ARNT 2 datasets
ChIP 501-mel GSE95280.ARNT.501-mel 327 bp overlap
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 285 bp overlap
ATRX 3 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 405 bp overlap
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 405 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 310 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 338 bp overlap
BRD4 6 datasets
ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 243 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 211 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 384 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 306 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 379 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 380 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 375 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 134 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 273 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 405 bp overlap
CSRNP3 1 dataset
ChIP SK-N-SH ENCFF710BXD 345 bp overlap
CTCF 3 datasets
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 101 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 284 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 324 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 328 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 330 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF829RWA 228 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 394 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 202 bp overlap
ESRRG 3 datasets
ChIP SK-N-SH ENCFF394HLU 285 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 305 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 325 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 332 bp overlap
ChIP DE DE-FOXA2-2 320 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 405 bp overlap
GATA2 9 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 185 bp overlap
ChIP ESF GSE108408.GATA2.ESF 264 bp overlap
ChIP SH-SY5Y ENCFF485YIB 361 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 405 bp overlap
ChIP SK-N-SH ENCFF764OZD 180 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 388 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 223 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 247 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 341 bp overlap
GATA3 10 datasets
ChIP BE2C GSE65664.GATA3.BE2C 285 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 312 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 384 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 372 bp overlap
ChIP NGP GSE65664.GATA3.NGP 204 bp overlap
ChIP SH-SY5Y ENCFF475HYF 405 bp overlap
ChIP SH-SY5Y ENCFF475HYF 207 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 393 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 333 bp overlap
ChIP SK-N-SH ENCFF040SSB 290 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 378 bp overlap
ChIP DE DE-GATA4-2 341 bp overlap
ChIP foregut GSE117136.GATA4.foregut 405 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 350 bp overlap
GATA6 11 datasets
ChIP AGS GSE51705.GATA6.AGS 303 bp overlap
ChIP AGS GSE51936.GATA6.AGS 127 bp overlap
ChIP DE DE-GATA6-1 366 bp overlap
ChIP DE DE-GATA6-2 322 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 247 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 323 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 277 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap
ChIP foregut GSE117136.GATA6.foregut 405 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 273 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 405 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 405 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 405 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 405 bp overlap
ChIP SK-N-SH ENCFF285GEQ 273 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 134 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 157 bp overlap
KDM1A 3 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 320 bp overlap
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 376 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 388 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 405 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 405 bp overlap
MITF 2 datasets
ChIP 501-mel GSE61965.MITF.501-mel 254 bp overlap
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 257 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 353 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 230 bp overlap
MYC 2 datasets
ChIP Kelly GSE138295.MYC.Kelly 164 bp overlap
ChIP NB69 GSE138295.MYC.NB69 405 bp overlap
MYCN 9 datasets
ChIP BE2C GSE80151.MYCN.BE2C 174 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 374 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 380 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 281 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 405 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 405 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 336 bp overlap
ChIP NGP GSE80151.MYCN.NGP 239 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 230 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 167 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 145 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 317 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 405 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 354 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 405 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 405 bp overlap
RAD21 4 datasets
ChIP RH4 GSE83726.RAD21.RH4 196 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 374 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 336 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 234 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 395 bp overlap
RELA 4 datasets
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 216 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 237 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 169 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 138 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 137 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 387 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 120 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 2 datasets
ChIP Caco-2 GSE112946.SMAD4.Caco-2 251 bp overlap
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
SMARCA4 6 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 75 bp overlap
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 57 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 392 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 272 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 353 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 405 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 221 bp overlap
SOX10 1 dataset
ChIP 501-mel GSE61965.SOX10.501-mel 382 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 248 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 144 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 321 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 385 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 238 bp overlap
TCF4 2 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 231 bp overlap
ChIP SK-N-SH ENCFF270OWF 405 bp overlap
TEAD4 3 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 302 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 302 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 282 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 360 bp overlap
TOX2 2 datasets
ChIP SK-N-SH ENCFF415OYE 297 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 217 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 381 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 380 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 111 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 177 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 317 bp overlap