chr12 : 114,636,854 114,637,073
219 bp 69 TFs 0 linked genes
This 219 bp open chromatin element has no linked target genes and is bound by 69 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:114,631,854 – 114,642,073
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AR 3 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 219 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 179 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 219 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 169 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 161 bp overlap
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 137 bp overlap
BRD4 12 datasets
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 147 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 219 bp overlap
ChIP HCC1937 GSE124748.BRD4.HCC1937 219 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 219 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 115 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 219 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 219 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 187 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 219 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 173 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 130 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 79 bp overlap
CHD4 1 dataset
ChIP HaCaT GSE139685.CHD4.HaCaT 167 bp overlap
CREBBP 3 datasets
ChIP MCF-7 ERP000901.CREBBP.MCF-7 158 bp overlap
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 219 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 219 bp overlap
CTCF 45 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 117 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 96 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 219 bp overlap
ChIP GM23338 ENCFF832KWE 103 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 126 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 219 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 69 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 172 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 139 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 144 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 219 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 200 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 101 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 65 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 146 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 59 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 166 bp overlap
ChIP Panc1 ENCFF056JQX 88 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 219 bp overlap
ChIP RWPE1 ENCFF200GQF 96 bp overlap
ChIP RWPE2 ENCFF911IEE 78 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 182 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 131 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 94 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 219 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 122 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 81 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 69 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 128 bp overlap
ChIP WI-38VA13 GSE41048.CTCF.WI-38VA13 180 bp overlap
ChIP brain ENCFF685VRG 127 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 78 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 50 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 66 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 202 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 90 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 99 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 57 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 219 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 93 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 103 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 116 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 152 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 116 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 219 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 102 bp overlap
ESR1 14 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 160 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 188 bp overlap
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 198 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 219 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 219 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 219 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 215 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 219 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 219 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 198 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 171 bp overlap
ChIP T-47D-B_E2 GSE80358.ESR1.T-47D-B_E2 113 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 219 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 219 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 219 bp overlap
FOXA1 2 datasets
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 115 bp overlap
ChIP prostate_P29 GSE130408.FOXA1.prostate_P29 124 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 219 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 137 bp overlap
ChIP DE DE-FOXA2-1 219 bp overlap
ChIP DE DE-FOXA2-2 189 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 64 bp overlap
GATA3 2 datasets
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 203 bp overlap
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 86 bp overlap
GATA4 5 datasets
ChIP A-549 GSE85002.GATA4.A-549 219 bp overlap
ChIP DE DE-GATA4-1 219 bp overlap
ChIP DE DE-GATA4-2 219 bp overlap
ChIP foregut GSE117136.GATA4.foregut 219 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 140 bp overlap
GATA6 8 datasets
ChIP AGS GSE51705.GATA6.AGS 219 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 205 bp overlap
ChIP DE DE-GATA6-1 219 bp overlap
ChIP DE DE-GATA6-2 219 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 218 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 84 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 219 bp overlap
ChIP foregut GSE117136.GATA6.foregut 219 bp overlap
GLIS2 2 datasets
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 89 bp overlap
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 87 bp overlap
GRHL2 4 datasets
ChIP HBE GSE46194.GRHL2.HBE 209 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 191 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 219 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 186 bp overlap
HOXB13 2 datasets
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 92 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 156 bp overlap
KDM1A 1 dataset
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 214 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 79 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 219 bp overlap
KLF4 2 datasets
ChIP WIBR3 GSE130417.KLF4.WIBR3 75 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 182 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 171 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 103 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 219 bp overlap
MED26 2 datasets
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 189 bp overlap
ChIP HEK293T GSE121024.MED26.HEK293T 60 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 110 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 219 bp overlap
NELFE 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 219 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 219 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 163 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 137 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 177 bp overlap
ChIP T-47D-A_R5020 GSE80358.PGR.T-47D-A_R5020 75 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 219 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 219 bp overlap
POLR2A 2 datasets
ChIP prostate gland ENCFF881OMH 219 bp overlap
ChIP vagina ENCFF305NWS 219 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 53 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 219 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 216 bp overlap
RAD21 4 datasets
ChIP GP5D GSE51234.RAD21.GP5D 219 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 219 bp overlap
ChIP HEC-1-B GSE139679.RAD21.HEC-1-B 79 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 97 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 150 bp overlap
REST 2 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 108 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 148 bp overlap
RUNX1 1 dataset
ChIP keratinocyte GSE98483.RUNX1.keratinocyte 131 bp overlap
SIN3A 1 dataset
ChIP brain-prefrontal-cortex_ad1 GSE106870.SIN3A.brain-prefrontal-cortex_ad1 53 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 219 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 153 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 219 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 139 bp overlap
SMARCB1 6 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 70 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 219 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 219 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 212 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 219 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 156 bp overlap
SMC1 2 datasets
ChIP HCT-116 GSE131606.SMC1.HCT-116 219 bp overlap
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 154 bp overlap
SMC1A 4 datasets
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 219 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 124 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 219 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 219 bp overlap
SMC3 2 datasets
ChIP GP5D GSE51234.SMC3.GP5D 219 bp overlap
ChIP HeLa-Kyoto_ESCO1-depleted GSE138405.SMC3.HeLa-Kyoto_ESCO1-depleted 174 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 151 bp overlap
SOX6 2 datasets
ChIP HepG2 ENCFF767OCK 219 bp overlap
ChIP HepG2 ENCFF767OCK 109 bp overlap
STAT3 2 datasets
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 195 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 120 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 219 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 219 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 219 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 58 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 219 bp overlap
TEAD4 6 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 144 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 130 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 174 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 168 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 219 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 90 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 219 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 91 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 204 bp overlap
TP53 1 dataset
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 144 bp overlap
TP63 17 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 193 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 219 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 219 bp overlap
ChIP HaCaT_dnRAS_TGFB GSE60814.TP63.HaCaT_dnRAS_TGFB 203 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 186 bp overlap
ChIP MCF-10A_DCIS GSE72009.TP63.MCF-10A_DCIS 119 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 157 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 200 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 163 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 191 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 219 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 219 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 219 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 207 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 116 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 216 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 176 bp overlap
TRPS1 2 datasets
ChIP MCF-7 GSE133072.TRPS1.MCF-7 219 bp overlap
ChIP T-47D GSE107013.TRPS1.T-47D 217 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 94 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 150 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 190 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 192 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 53 bp overlap