chr11 : 112,877,665 – 112,877,904

239 bp 57 TFs 0 linked genes

This 239 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

57 transcription factors

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 191 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 185 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 7 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 154 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 239 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 239 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 239 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 239 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 86 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 227 bp overlap

CBFB 1 dataset

ChIP ME-1 GSE46044.CBFB.ME-1 228 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 205 bp overlap

CHD8 1 dataset

ChIP T-47D GSE62428.CHD8.T-47D 156 bp overlap

CTCF 1 dataset

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 239 bp overlap

EP300 1 dataset

ChIP neural ENCSR843ZUP.EP300.neural 239 bp overlap

ERG 1 dataset

ChIP WTC11 ENCFF011YUL 166 bp overlap

EZH2 1 dataset

ChIP THP-1 GSE135024.EZH2.THP-1 124 bp overlap

FLI1 2 datasets

ChIP SKNO-1 GSE23730.FLI1.SKNO-1 239 bp overlap

ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 218 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 203 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HEXIM1 1 dataset

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap

MYCN 1 dataset

ChIP Kelly GSE94822.MYCN.Kelly 138 bp overlap

MYOD1 4 datasets

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 209 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 210 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 239 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 239 bp overlap

NANOG 2 datasets

ChIP WA01 ENCSR000BMT.NANOG.WA01 139 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 205 bp overlap

NEUROG2 1 dataset

Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

NHLH2 1 dataset

Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BJR.NR3C1.A-549 73 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

OLIG2 1 dataset

ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 203 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 229 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 76 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 158 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 189 bp overlap

POU5F1 1 dataset

ChIP BG03 GSE21614.POU5F1.BG03 235 bp overlap

RAD21 3 datasets

ChIP H1 ENCFF698EWO 185 bp overlap

ChIP RH4 GSE83726.RAD21.RH4 146 bp overlap

ChIP neural cell ENCFF564MOT 239 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 239 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 194 bp overlap

RUNX1 1 dataset

ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 211 bp overlap

RXR 1 dataset

ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 183 bp overlap

SIN3A 1 dataset

ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 143 bp overlap

SIX2 2 datasets

ChIP HEK GSE73865.SIX2.HEK 81 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 94 bp overlap

SMARCA4 2 datasets

ChIP NSC GSE125033.SMARCA4.NSC 233 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 154 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 168 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 182 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 186 bp overlap

SMC3 1 dataset

ChIP hESC_D0 GSE116862.SMC3.hESC_D0 180 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 168 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 218 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 144 bp overlap

TBP 1 dataset

ChIP WA01 ENCSR000ECB.TBP.WA01 141 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 145 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

TP53 1 dataset

ChIP WTC11 ENCFF359JCU 239 bp overlap

TP63 1 dataset

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 121 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 199 bp overlap

ZEB1 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 165 bp overlap

ZNF184 1 dataset

ChIP WTC11 ENCFF352POG 212 bp overlap

ZNF449 2 datasets

ChIP HEK293 ENCFF764ZIC 239 bp overlap

ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 228 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 229 bp overlap

ZSCAN4 3 datasets

ChIP HEK293 ENCFF381BKT 71 bp overlap

ChIP HEK293 ENCFF381BKT 239 bp overlap

ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 112 bp overlap