chr11 : 78,428,370 – 78,428,652
282 bp 62 TFs 1 linked gene
This 282 bp open chromatin element is linked to LINC02728 and is bound by 62 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC02728 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:78,423,370 – 78,433,652
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 243 bp overlap
ChIP K562 ENCFF938UXQ 232 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCFF655FLB 153 bp overlap
BRD4 8 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 271 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 237 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 113 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 222 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 276 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 282 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 232 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 93 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 257 bp overlap
ChIP K562 ENCFF963TXY 158 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 279 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 275 bp overlap
ChIP K562 ENCFF673OEZ 240 bp overlap
CCNT2 1 dataset
ChIP K562 ENCFF199GSZ 174 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 170 bp overlap
CDK9 1 dataset
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 215 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 175 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 217 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 160 bp overlap
ERG 17 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 168 bp overlap
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 181 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 193 bp overlap
ChIP aortic-endothelial-cell_D1 GSE139377.ERG.aortic-endothelial-cell_D1 159 bp overlap
ChIP aortic-endothelial-cell_D13 GSE139377.ERG.aortic-endothelial-cell_D13 202 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 149 bp overlap
ChIP aortic-endothelial-cell_D17 GSE139377.ERG.aortic-endothelial-cell_D17 180 bp overlap
ChIP aortic-endothelial-cell_D21 GSE139377.ERG.aortic-endothelial-cell_D21 166 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 169 bp overlap
ChIP aortic-endothelial-cell_D26 GSE139377.ERG.aortic-endothelial-cell_D26 176 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 159 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 77 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 209 bp overlap
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 187 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 132 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 148 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 180 bp overlap
ETS1 7 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 282 bp overlap
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 149 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 140 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 161 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 149 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 167 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 140 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 172 bp overlap
FLI1 2 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 282 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 136 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 282 bp overlap
ChIP DE DE-FOXA2-2 282 bp overlap
GATA2 3 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 282 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 282 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 282 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 282 bp overlap
ChIP DE DE-GATA4-2 282 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 282 bp overlap
ChIP DE DE-GATA6-2 282 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 282 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 282 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 213 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 123 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 173 bp overlap
IKZF1 4 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 197 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 272 bp overlap
ChIP K562 ENCFF348IBL 214 bp overlap
ChIP K562 ENCFF771OHZ 282 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 266 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 175 bp overlap
LMO2 2 datasets
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 279 bp overlap
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 202 bp overlap
MYB 3 datasets
ChIP DU528 GSE94000.MYB.DU528 249 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 220 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 211 bp overlap
NANOG 1 dataset
ChIP WA01 ERP004238.NANOG.WA01 188 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 282 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 147 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 111 bp overlap
NR3C1 2 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 209 bp overlap
ChIP NALM-6 GSE67046.NR3C1.NALM-6 207 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 247 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 282 bp overlap
PML 1 dataset
ChIP GM12878 ENCFF160JQZ 109 bp overlap
POLR2A 2 datasets
ChIP GM12892 ENCFF542ZFO 66 bp overlap
ChIP vagina ENCFF305NWS 65 bp overlap
RAD21 1 dataset
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 164 bp overlap
RELA 12 datasets
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 122 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 183 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 111 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 93 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 157 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 153 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 107 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 149 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 162 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 147 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 204 bp overlap
RNF2 1 dataset
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 282 bp overlap
RUNX1 10 datasets
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 198 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 197 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 236 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 282 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 282 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 197 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 282 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 224 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 239 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 170 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 57 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 282 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 282 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 282 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 282 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 282 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 282 bp overlap
ChIP K562 ENCFF506JCB 282 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 212 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 278 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 208 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 259 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 209 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 204 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 267 bp overlap
ChIP HL-60 ENCFF645GBT 259 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 203 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 58 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 102 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 282 bp overlap
TAL1 10 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 263 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 259 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 195 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 183 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 146 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 174 bp overlap
ChIP K562 ENCFF620GMX 199 bp overlap
ChIP K562 ENCFF661CCK 240 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 260 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 236 bp overlap
TBX18 1 dataset
ChIP K562 ENCFF473CJK 256 bp overlap
TCF12 6 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 246 bp overlap
ChIP K562 ENCFF909RDY 282 bp overlap
ChIP K562 ENCFF931DJY 282 bp overlap
ChIP Kasumi-1 GSE43834.TCF12.Kasumi-1 131 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 249 bp overlap
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 210 bp overlap
TCF3 5 datasets
ChIP 697_HF GSE138031.TCF3.697_HF 142 bp overlap
ChIP K-562 ENCSR970OJY.TCF3.K-562 235 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 207 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 282 bp overlap
ChIP RPMI8402 GSE39179.TCF3.RPMI8402 180 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 133 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 137 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 282 bp overlap
TP53 1 dataset
ChIP lymphocyte_116_Nutlin GSE110368.TP53.lymphocyte_116_Nutlin 81 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 244 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 230 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 277 bp overlap
ChIP K562 ENCFF795CMH 282 bp overlap
ChIP K562 ENCFF795CMH 232 bp overlap
ChIP K562 ENCFF975RXS 282 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 193 bp overlap
ZNF583 1 dataset
ChIP K562 ENCFF879KXH 282 bp overlap
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