chr11:71,750,971–71,751,686

chr11 : 71,750,971 – 71,751,686

715 bp 86 TFs 7 linked genes

This 715 bp open chromatin element is linked to 7 target genes and is bound by 86 transcription factors.

Linked Genes

7 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000285933		5.6 kb	Proximal	Proximity
ENSG00000291247		29.0 kb	Distal	Multiome
ALG1L9P		62.6 kb	Distal	Multiome
KRTAP5-11		147.9 kb	Distal	Multiome
XNDC1N		177.4 kb	Distal	Multiome
RNF121		177.8 kb	Distal	Multiome
NADSYN1		298.0 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

86 transcription factors

Ahr::Arnt 1 dataset

Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap

Arid3a 1 dataset

Motif DE_24h DE_24h-Arid3a_MA0151.1 6 bp overlap

BCL11A 1 dataset

Motif DE_24h DE_24h-BCL11A_MA2324.1 7 bp overlap

Motif DE_24h DE_24h-CDX1_MA0878.3 10 bp overlap

Motif DE_24h DE_24h-CDX2_MA0465.3 8 bp overlap

CTCF 21 datasets

ChIP BE2C ENCFF757SRF 317 bp overlap

ChIP Caco-2 ENCFF934QYS 217 bp overlap

ChIP GM23338 ENCFF531QOI 314 bp overlap

ChIP GM23338 ENCFF832KWE 416 bp overlap

ChIP H9 ENCFF152GTF 219 bp overlap

ChIP Peyer's patch ENCFF828IDE 308 bp overlap

ChIP VCaP ENCFF858YQT 434 bp overlap

ChIP VCaP ENCFF858YQT 631 bp overlap

ChIP endodermal cell ENCFF471YCZ 290 bp overlap

ChIP endothelial cell ENCFF663LIE 399 bp overlap

ChIP endothelial cell ENCFF663LIE 601 bp overlap

ChIP epithelial cell of prostate ENCFF086GTI 497 bp overlap

ChIP foreskin keratinocyte ENCFF980OWR 344 bp overlap

ChIP glutamatergic neuron ENCFF816BTR 375 bp overlap

ChIP keratinocyte ENCFF667ULX 325 bp overlap

ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 139 bp overlap

ChIP mesothelial cell of epicardium ENCFF427RFE 408 bp overlap

ChIP mesothelial cell of epicardium ENCFF427RFE 571 bp overlap

ChIP neural crest cell ENCFF182LWK 367 bp overlap

ChIP progenitor cell of endocrine pancreas ENCFF492KHV 227 bp overlap

ChIP type B pancreatic cell ENCFF910FNQ 395 bp overlap

Motif DE_24h DE_24h-E2F2_MA0864.3 13 bp overlap

Motif DE_24h DE_24h-E2F4_MA0470.3 13 bp overlap

Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap

Motif DE_24h DE_24h-E2F7_MA0758.1 14 bp overlap

Motif DE_24h DE_24h-E2F8_MA0865.3 9 bp overlap

Motif DE_24h DE_24h-ETV2_MA0762.2 9 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_24h DE_24h-ETV5FOXO1_MA1947.2 10 bp overlap

FEZF2 1 dataset

Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 376 bp overlap

ChIP DE DE-FOXA2-1 222 bp overlap

ChIP DE DE-FOXA2-2 467 bp overlap

Foxq1 1 dataset

Motif DE_24h DE_24h-Foxq1_MA0040.2 10 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 541 bp overlap

ChIP DE DE-GATA4-2 715 bp overlap

Motif DE_24h DE_24h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_24h DE_24h-GATA5_MA0766.3 8 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 707 bp overlap

ChIP DE DE-GATA6-2 618 bp overlap

Motif DE_24h DE_24h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 603 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 618 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 712 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 610 bp overlap

GLIS2 1 dataset

Motif DE_24h DE_24h-GLIS2_MA0736.1 14 bp overlap

Gata3 1 dataset

Motif DE_24h DE_24h-Gata3_MA0037.5 8 bp overlap

HOXB4 1 dataset

Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap

Hmga1 1 dataset

Motif DE_24h DE_24h-Hmga1_MA2124.1 8 bp overlap

Hnf1A 1 dataset

Motif DE_24h DE_24h-Hnf1A_MA1991.2 10 bp overlap

Hoxa13 1 dataset

Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap

IKZF1 1 dataset

Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap

IKZF2 1 dataset

Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap

Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 545 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 624 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 519 bp overlap

Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap

MEIS1 2 datasets

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

Motif DE_24h DE_24h-NFIA_MA0670.2 6 bp overlap

Motif DE_24h DE_24h-NFIX_MA0671.2 6 bp overlap

NR1I3 1 dataset

Motif DE_24h DE_24h-NR1I3_MA1534.2 8 bp overlap

NR2C2 1 dataset

Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap

NR6A1 1 dataset

Motif DE_24h DE_24h-NR6A1_MA1541.2 14 bp overlap

PATZ1 1 dataset

Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap

Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap

PHOX2A 1 dataset

Motif DE_24h DE_24h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_24h DE_24h-PHOX2B_MA0681.3 12 bp overlap

PKNOX1 1 dataset

Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap

POU1F1 1 dataset

Motif DE_24h DE_24h-POU1F1_MA0784.3 14 bp overlap

POU2F1::SOX2 1 dataset

Motif DE_24h DE_24h-POU2F1SOX2_MA1962.1 17 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 439 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 471 bp overlap

PROP1 1 dataset

Motif DE_24h DE_24h-PROP1_MA0715.1 11 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_24h DE_24h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif DE_24h DE_24h-REL_MA0101.1 10 bp overlap

Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap

Motif DE_24h DE_24h-Rarb_MA0858.1 17 bp overlap

SATB1 2 datasets

Motif DE_24h DE_24h-SATB1_MA1963.2 7 bp overlap

Motif DE_24h DE_24h-SATB1_MA1963.2 7 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 261 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 667 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 715 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 715 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 715 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 715 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 355 bp overlap

SOX13 1 dataset

Motif DE_24h DE_24h-SOX13_MA1120.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 345 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 601 bp overlap

Motif DE_24h DE_24h-SOX2_MA0143.5 7 bp overlap

SOX21 2 datasets

Motif DE_24h DE_24h-SOX21_MA0866.1 15 bp overlap

Motif DE_24h DE_24h-SOX21_MA0866.1 15 bp overlap

Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap

Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap

SREBF1 1 dataset

Motif DE_24h DE_24h-SREBF1_MA0829.3 10 bp overlap

Motif DE_24h DE_24h-Six3_MA0631.2 11 bp overlap

Motif DE_24h DE_24h-Sox1_MA0870.1 15 bp overlap

Sox17 1 dataset

Motif DE_24h DE_24h-Sox17_MA0078.3 10 bp overlap

Motif DE_24h DE_24h-Sox3_MA0514.3 7 bp overlap

Motif DE_24h DE_24h-Sox5_MA0087.3 8 bp overlap

Motif DE_24h DE_24h-Sox7_MA2095.1 10 bp overlap

Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap

TFAP2A 1 dataset

Motif DE_24h DE_24h-TFAP2A_MA0872.1 13 bp overlap

TFAP2C 1 dataset

Motif DE_24h DE_24h-TFAP2C_MA0815.1 13 bp overlap

TFCP2 1 dataset

Motif DE_24h DE_24h-TFCP2_MA1968.2 9 bp overlap

TFDP1 1 dataset

Motif DE_24h DE_24h-TFDP1_MA1122.2 8 bp overlap

TGIF1 1 dataset

Motif DE_24h DE_24h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_24h DE_24h-TGIF2_MA0797.1 12 bp overlap

TGIF2LX 1 dataset

Motif DE_24h DE_24h-TGIF2LX_MA1571.1 12 bp overlap

TGIF2LY 1 dataset

Motif DE_24h DE_24h-TGIF2LY_MA1572.1 12 bp overlap

TRPS1 1 dataset

Motif DE_24h DE_24h-TRPS1_MA1970.2 8 bp overlap

VEZF1 1 dataset

Motif DE_24h DE_24h-VEZF1_MA1578.2 6 bp overlap

Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap

Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap

Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap

ZNF547 1 dataset

Motif DE_24h DE_24h-ZNF547_MA2334.1 13 bp overlap

ZNF766 1 dataset

Motif DE_24h DE_24h-ZNF766_MA2098.1 9 bp overlap