Transcription factors with Perturb-seq knockdown data for ENSG00000285933. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = ENSG00000285933 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.
| TF | Mean coef | Binding | Outlier | TF→Gene link |
|---|
Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of ENSG00000285933, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.
| Accessibility | Element | Dist. to TSS | Link type | TFs |
|---|---|---|---|---|
| chr11:71,447,762–71,449,172 | 296.9 kb | Distal (>10kb) Multiome | 802 | |
| chr11:71,452,706–71,453,785 | 292.2 kb | Distal (>10kb) Multiome | 636 | |
| chr11:71,487,897–71,488,597 | 257.0 kb | Distal (>10kb) Multiome | 181 | |
| chr11:71,750,971–71,751,686 | 5.9 kb | Proximal (<10kb) Multiome | 86 | |
| chr11:71,786,388–71,787,283 | 41.8 kb | Distal (>10kb) Multiome | 289 | |
| chr11:71,928,161–71,929,328 | 183.6 kb | Distal (>10kb) Multiome | 869 | |
| chr11:72,040,697–72,041,585 | 295.7 kb | Distal (>10kb) Multiome | 586 |
Genomic view of the ENSG00000285933 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.