chr11 : 41,427,530 – 41,428,399
869 bp 94 TFs 0 linked genes
This 869 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:41,422,530 – 41,433,399
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 191 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 252 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
CEBPA 4 datasets
Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap
Motif DE_24h DE_24h-CEBPA_MA0102.5 10 bp overlap
Motif DE_36h DE_36h-CEBPA_MA0102.5 10 bp overlap
Motif DE_60h DE_60h-CEBPA_MA0102.5 10 bp overlap
CEBPD 4 datasets
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Motif DE_24h DE_24h-CEBPD_MA0836.3 8 bp overlap
Motif DE_36h DE_36h-CEBPD_MA0836.3 8 bp overlap
Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap
CREB1 4 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif DE_24h DE_24h-CREB1_MA0018.5 8 bp overlap
Motif DE_36h DE_36h-CREB1_MA0018.5 8 bp overlap
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 127 bp overlap
DUX4 6 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 173 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 159 bp overlap
FEZF2 3 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FOS 4 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif DE_24h DE_24h-FOS_MA1951.2 13 bp overlap
Motif DE_36h DE_36h-FOS_MA1951.2 13 bp overlap
Motif DE_60h DE_60h-FOS_MA1951.2 13 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 869 bp overlap
ChIP DE DE-FOXA2-2 869 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 710 bp overlap
ChIP DE DE-GATA4-2 869 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 581 bp overlap
ChIP DE DE-GATA6-2 772 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 635 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 348 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 288 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 245 bp overlap
Gli1 3 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif DE_36h DE_36h-Gli1_MA1990.2 10 bp overlap
Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Irf1 3 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
JUN 6 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 535 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 288 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
KLF14 2 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
MAFF 4 datasets
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
Motif DE_24h DE_24h-MAFF_MA0495.4 11 bp overlap
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
MAFK 2 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 232 bp overlap
MEIS1 4 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 185 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 215 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 326 bp overlap
Mafb 4 datasets
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
Motif DE_24h DE_24h-Mafb_MA0117.3 11 bp overlap
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
Mafg 2 datasets
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 289 bp overlap
NEUROD1 1 dataset
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
NFATC3 3 datasets
ChIP GM12878 ENCFF340KVJ 354 bp overlap
ChIP GM12878 ENCFF340KVJ 154 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 198 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 4 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap
NR2F1 7 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Motif DE_36h DE_36h-NR2F1_MA0017.3 12 bp overlap
Motif DE_60h DE_60h-NR2F1_MA0017.3 12 bp overlap
ChIP GM12878 ENCFF273VKX 287 bp overlap
ChIP GM12878 ENCFF273VKX 86 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 190 bp overlap
NRL 4 datasets
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
Motif DE_24h DE_24h-NRL_MA0842.3 12 bp overlap
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr1h3::Rxra 1 dataset
Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap
Nr2F6 3 datasets
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_36h DE_36h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
PHOX2B 1 dataset
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 478 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
Pparg::Rxra 1 dataset
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
RARA 5 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif DE_24h DE_24h-RARA_MA0729.1 18 bp overlap
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 61 bp overlap
RELA 4 datasets
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
Motif DE_24h DE_24h-RELA_MA0107.1 10 bp overlap
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
RXRA::VDR 1 dataset
Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Rarg 3 datasets
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap
Motif DE_60h DE_60h-Rarg_MA0859.2 15 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 135 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 299 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 576 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 316 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 106 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 215 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 215 bp overlap
TBX19 4 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap
Motif DE_60h DE_60h-TBX19_MA0804.2 17 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 261 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 316 bp overlap
TCF12 3 datasets
ChIP GM12878 ENCFF433DMU 292 bp overlap
ChIP GM12878 ENCFF433DMU 90 bp overlap
ChIP GM12878 ENCSR725VFL.TCF12.GM12878 188 bp overlap
TEAD4 2 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 255 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Tfcp2l1 3 datasets
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Motif DE_36h DE_36h-Tfcp2l1_MA0145.2 14 bp overlap
Motif DE_60h DE_60h-Tfcp2l1_MA0145.2 14 bp overlap
Wt1 3 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
Yy1 3 datasets
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
Motif DE_60h DE_60h-Yy1_MA0095.4 8 bp overlap
ZFP42 3 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap
Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap
ZIC4 3 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
Motif DE_60h DE_60h-ZIC4_MA0751.2 14 bp overlap
ZIC5 3 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 262 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF528 4 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap
Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap
ZNF667 3 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
ZNF707 5 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap
Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap
Motif DE_60h DE_60h-ZNF707_MA1715.1 15 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
ZSCAN29 2 datasets
ChIP GM12878 ENCFF983OKU 109 bp overlap
ChIP GM12878 ENCSR412YGM.ZSCAN29.GM12878 50 bp overlap
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