chr11 : 35,943,391 35,943,566
175 bp 42 TFs 1 linked gene
This 175 bp open chromatin element is linked to LDLRAD3 and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LDLRAD3 494 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:35,938,391 – 35,948,566
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
AR 3 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 94 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 134 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 159 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 119 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 89 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 169 bp overlap
BRD4 10 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 50 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 125 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 125 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 88 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 113 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 140 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 53 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 59 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 175 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 97 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 175 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 175 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 66 bp overlap
CTCF 2 datasets
ChIP brain ENCFF163BBN 118 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 70 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 70 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF472NFV 175 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF919OMP 63 bp overlap
HOXB13 16 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 99 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 128 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 95 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 129 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 100 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 175 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 51 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 77 bp overlap
ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 87 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 75 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 111 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 70 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 67 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 175 bp overlap
ChIP prostate_P7 GSE130408.HOXB13.prostate_P7 72 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 175 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 175 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 172 bp overlap
KLF5 1 dataset
ChIP HCC95 GSE88976.KLF5.HCC95 175 bp overlap
MAZ 1 dataset
ChIP K562 ENCFF982GSZ 63 bp overlap
MED26 1 dataset
ChIP HCT-116 GSE121355.MED26.HCT-116 58 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 175 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 175 bp overlap
MXD1 1 dataset
ChIP HepG2 ENCFF717MYN 61 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 175 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 102 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 175 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 144 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 175 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 77 bp overlap
POLR2A 1 dataset
ChIP IMR-90 ENCFF672YWV 175 bp overlap
RAD21 2 datasets
ChIP GP5D GSE51234.RAD21.GP5D 175 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 144 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 63 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR076YPO.RNF2.K-562 172 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 167 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 109 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 175 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 139 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 175 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 101 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 74 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 125 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 175 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 98 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 165 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 175 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 154 bp overlap