chr11 : 17,434,869 17,435,423
554 bp 84 TFs 2 linked genes
This 554 bp open chromatin element is linked to NUCB2 and PIK3C2A and is bound by 84 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
NUCB2 158.5 kb Distal Multiome
PIK3C2A 227.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:17,429,869 – 17,440,423
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 58 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 260 bp overlap
CDK8 1 dataset
ChIP SW480 GSE53602.CDK8.SW480 101 bp overlap
EBF1 1 dataset
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
EGR1 6 datasets
Motif DE_36h DE_36h-EGR1_MA0162.5 10 bp overlap
Motif DE_48h DE_48h-EGR1_MA0162.5 10 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 175 bp overlap
ChIP K562 ENCFF006PJY 98 bp overlap
ChIP K562 ENCFF113OPQ 451 bp overlap
ChIP K562 ENCFF895KGN 385 bp overlap
EGR2 2 datasets
Motif DE_48h DE_48h-EGR2_MA0472.2 11 bp overlap
ChIP HEK293 ENCFF336LFH 361 bp overlap
EGR3 1 dataset
Motif DE_48h DE_48h-EGR3_MA0732.2 11 bp overlap
ELF1 1 dataset
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
EOMES 1 dataset
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Ebf4 1 dataset
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Erg 1 dataset
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 386 bp overlap
ChIP DE DE-FOXA2-2 392 bp overlap
GABPA 1 dataset
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 330 bp overlap
ChIP DE DE-GATA4-2 398 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 313 bp overlap
ChIP DE DE-GATA6-2 448 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 421 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 532 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 332 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 271 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 264 bp overlap
HMBOX1 2 datasets
ChIP K562 ENCFF055GAZ 513 bp overlap
ChIP K562 ENCFF317JJX 508 bp overlap
Hic1 1 dataset
Motif DE_36h DE_36h-Hic1_MA0739.2 8 bp overlap
INSM1 1 dataset
Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap
Ikzf3 1 dataset
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
Isl1 2 datasets
Motif DE_36h DE_36h-Isl1_MA1608.2 7 bp overlap
Motif DE_48h DE_48h-Isl1_MA1608.2 7 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap
KLF12 2 datasets
Motif DE_36h DE_36h-KLF12_MA0742.2 9 bp overlap
Motif DE_48h DE_48h-KLF12_MA0742.2 9 bp overlap
KLF4 2 datasets
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap
KLF9 1 dataset
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 142 bp overlap
MAZ 2 datasets
Motif DE_36h DE_36h-MAZ_MA1522.2 8 bp overlap
Motif DE_48h DE_48h-MAZ_MA1522.2 8 bp overlap
MGA 1 dataset
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MITF 1 dataset
ChIP melanocyte_BRAFV600E GSE50681.MITF.melanocyte_BRAFV600E 173 bp overlap
MYF5 1 dataset
Motif DE_36h DE_36h-MYF5_MA1641.2 8 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 241 bp overlap
Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap
NKX6-3 2 datasets
Motif DE_36h DE_36h-NKX6-3_MA1530.2 8 bp overlap
Motif DE_48h DE_48h-NKX6-3_MA1530.2 8 bp overlap
NR1H2::RXRA 2 datasets
Motif DE_36h DE_36h-NR1H2RXRA_MA0115.1 17 bp overlap
Motif DE_48h DE_48h-NR1H2RXRA_MA0115.1 17 bp overlap
NR1H4::RXRA 2 datasets
Motif DE_36h DE_36h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_48h DE_48h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap
NR4A2::RXRA 2 datasets
Motif DE_36h DE_36h-NR4A2RXRA_MA1147.2 13 bp overlap
Motif DE_48h DE_48h-NR4A2RXRA_MA1147.2 13 bp overlap
Neurod2 2 datasets
Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
OSR2 1 dataset
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PATZ1 2 datasets
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
Motif DE_48h DE_48h-PATZ1_MA1961.2 11 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 171 bp overlap
PRDM9 2 datasets
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Ptf1A 1 dataset
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
RELB 2 datasets
Motif DE_36h DE_36h-RELB_MA1117.2 7 bp overlap
Motif DE_48h DE_48h-RELB_MA1117.2 7 bp overlap
REST 1 dataset
Motif DE_36h DE_36h-REST_MA0138.3 20 bp overlap
Runx1 2 datasets
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 345 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 396 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 334 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 451 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 340 bp overlap
SP2 2 datasets
Motif DE_36h DE_36h-SP2_MA0516.3 9 bp overlap
Motif DE_48h DE_48h-SP2_MA0516.3 9 bp overlap
TBR1 1 dataset
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 2 datasets
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_36h DE_36h-TFAP2B_MA0813.1 13 bp overlap
TFAP2C 2 datasets
Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0815.1 13 bp overlap
THAP1 1 dataset
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
Tbx6 1 dataset
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
ZBTB18 1 dataset
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 387 bp overlap
ZNF140 2 datasets
Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
ZNF148 2 datasets
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
Motif DE_48h DE_48h-ZNF148_MA1653.2 10 bp overlap
ZNF257 2 datasets
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
ZNF281 3 datasets
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap
ZNF530 2 datasets
Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap
Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap
ZNF667 2 datasets
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Motif DE_48h DE_48h-ZNF667_MA1984.2 11 bp overlap
ZSCAN31 2 datasets
Motif DE_36h DE_36h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_48h DE_48h-ZSCAN31_MA1722.2 18 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zfp961 1 dataset
Motif DE_36h DE_36h-Zfp961_MA2126.1 8 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap