chr10 : 117,132,643 – 117,133,100
457 bp 49 TFs 1 linked gene
This 457 bp open chromatin element is linked to VAX1 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
VAX1 5.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:117,127,643 – 117,138,100
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 284 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 410 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 457 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 457 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 240 bp overlap
BRD4 3 datasets
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 423 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 253 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 216 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 457 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 326 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 359 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 306 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 205 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 401 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 457 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 441 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 244 bp overlap
ETS1 3 datasets
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 173 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 173 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 173 bp overlap
EZH1 1 dataset
ChIP ProEs_SHEZH2 GSE59087.EZH1.ProEs_SHEZH2 328 bp overlap
EZH2 28 datasets
ChIP GM23338 ENCFF613YON 457 bp overlap
ChIP GM23338 ENCFF886DXX 359 bp overlap
ChIP H1 ENCFF232NZA 457 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 457 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 457 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 275 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 357 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 57 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 457 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 430 bp overlap
ChIP astrocyte ENCFF365JTP 457 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 457 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 435 bp overlap
ChIP fibroblast of lung ENCFF479BAW 163 bp overlap
ChIP fibroblast of lung ENCFF479BAW 85 bp overlap
ChIP hESC GSE113817.EZH2.hESC 272 bp overlap
ChIP hepatocyte ENCFF118DKH 174 bp overlap
ChIP hepatocyte ENCFF552DZB 457 bp overlap
ChIP keratinocyte ENCFF070STK 380 bp overlap
ChIP keratinocyte ENCFF070STK 304 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 372 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 438 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 457 bp overlap
ChIP neural progenitor cell ENCFF018MKA 457 bp overlap
ChIP neural progenitor cell ENCFF472NFV 457 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 278 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 250 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 252 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 162 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 316 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 457 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 434 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 227 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 250 bp overlap
HNRNPLL 4 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 298 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 292 bp overlap
ChIP K562 ENCFF541ZGX 421 bp overlap
ChIP K562 ENCFF598PWW 421 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 457 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 457 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 395 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 396 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 288 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 248 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 457 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 192 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 135 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 226 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 242 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 231 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 226 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 227 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 391 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 457 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 351 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 333 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 70 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-15min GSE75562.RELA.HEK293_TNF-15min 160 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 457 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 196 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 366 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 321 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 374 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 352 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 298 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 375 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 410 bp overlap
SMC1A-B 1 dataset
ChIP TC-32 GSE115250.SMC1A-B.TC-32 191 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 132 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 277 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 337 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 447 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 457 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 228 bp overlap
ChIP K562 ENCFF397TBJ 317 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 457 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 457 bp overlap
ChIP NT2/D1 ENCFF574SXS 455 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 457 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 292 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 417 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 301 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 208 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 157 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 378 bp overlap
ZNF605 1 dataset
ChIP HEK293T GSE78099.ZNF605.HEK293T 221 bp overlap
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