chr10 : 94,103,047 – 94,103,450
403 bp 124 TFs 1 linked gene
This 403 bp open chromatin element is linked to PLCE1-AS2 and is bound by 124 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PLCE1-AS2 1.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:94,098,047 – 94,108,450
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
ALX3 2 datasets
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
Motif DE_60h DE_60h-ALX3_MA0634.2 6 bp overlap
ARGFX 2 datasets
Motif DE_36h DE_36h-ARGFX_MA1463.2 8 bp overlap
Motif DE_60h DE_60h-ARGFX_MA1463.2 8 bp overlap
Arx 2 datasets
Motif DE_36h DE_36h-Arx_MA0874.2 10 bp overlap
Motif DE_60h DE_60h-Arx_MA0874.2 10 bp overlap
BHLHE40 1 dataset
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 76 bp overlap
DRGX 2 datasets
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
Motif DE_60h DE_60h-DRGX_MA1481.2 6 bp overlap
EMX1 2 datasets
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
Motif DE_60h DE_60h-EMX1_MA0612.3 6 bp overlap
EMX2 2 datasets
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
Motif DE_60h DE_60h-EMX2_MA0886.2 6 bp overlap
EN1 2 datasets
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
Motif DE_60h DE_60h-EN1_MA0027.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 327 bp overlap
ERF::SREBF2 1 dataset
Motif DE_36h DE_36h-ERFSREBF2_MA1939.2 16 bp overlap
ESX1 2 datasets
Motif DE_36h DE_36h-ESX1_MA0644.3 7 bp overlap
Motif DE_60h DE_60h-ESX1_MA0644.3 7 bp overlap
EVX1 2 datasets
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
Motif DE_60h DE_60h-EVX1_MA0887.2 6 bp overlap
EVX2 2 datasets
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
Motif DE_60h DE_60h-EVX2_MA0888.2 6 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 145 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 251 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 134 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 267 bp overlap
ChIP DE DE-FOXA2-1 403 bp overlap
ChIP DE DE-FOXA2-2 403 bp overlap
FOXD3 1 dataset
Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap
FOXH1 1 dataset
Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 139 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 403 bp overlap
ChIP DE DE-GATA4-2 403 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 403 bp overlap
ChIP foregut GSE117136.GATA4.foregut 403 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 243 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 403 bp overlap
ChIP DE DE-GATA6-2 403 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 336 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 403 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 403 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 403 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 403 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 403 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 403 bp overlap
ChIP foregut GSE117136.GATA6.foregut 403 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 293 bp overlap
GSX1 2 datasets
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
Motif DE_60h DE_60h-GSX1_MA0892.2 6 bp overlap
GSX2 2 datasets
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
Motif DE_60h DE_60h-GSX2_MA0893.3 7 bp overlap
HNF1A 2 datasets
Motif DE_36h DE_36h-HNF1A_MA0046.3 13 bp overlap
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
HNF1B 2 datasets
Motif DE_36h DE_36h-HNF1B_MA0153.2 13 bp overlap
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
HNF4A 1 dataset
Motif DE_36h DE_36h-HNF4A_MA1494.2 14 bp overlap
HOXA1 2 datasets
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
Motif DE_60h DE_60h-HOXA1_MA1495.2 6 bp overlap
HOXA10 2 datasets
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap
HOXA2 2 datasets
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
Motif DE_60h DE_60h-HOXA2_MA0900.3 6 bp overlap
HOXA3 2 datasets
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
HOXA5 2 datasets
Motif DE_36h DE_36h-HOXA5_MA0158.2 8 bp overlap
Motif DE_60h DE_60h-HOXA5_MA0158.2 8 bp overlap
HOXA6 2 datasets
Motif DE_36h DE_36h-HOXA6_MA1497.2 7 bp overlap
Motif DE_60h DE_60h-HOXA6_MA1497.2 7 bp overlap
HOXB1 2 datasets
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
Motif DE_60h DE_60h-HOXB1_MA2093.1 7 bp overlap
HOXB2 2 datasets
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
Motif DE_60h DE_60h-HOXB2_MA0902.3 6 bp overlap
HOXB3 2 datasets
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
Motif DE_60h DE_60h-HOXB3_MA0903.2 6 bp overlap
HOXB5 2 datasets
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
Motif DE_60h DE_60h-HOXB5_MA0904.3 6 bp overlap
HOXB6 2 datasets
Motif DE_36h DE_36h-HOXB6_MA1500.2 7 bp overlap
Motif DE_60h DE_60h-HOXB6_MA1500.2 7 bp overlap
HOXB7 2 datasets
Motif DE_36h DE_36h-HOXB7_MA1501.2 7 bp overlap
Motif DE_60h DE_60h-HOXB7_MA1501.2 7 bp overlap
HOXB8 2 datasets
Motif DE_36h DE_36h-HOXB8_MA1502.2 7 bp overlap
Motif DE_60h DE_60h-HOXB8_MA1502.2 7 bp overlap
HOXC13 1 dataset
Motif DE_36h DE_36h-HOXC13_MA0907.2 9 bp overlap
HOXC8 2 datasets
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
Motif DE_60h DE_60h-HOXC8_MA1505.2 6 bp overlap
HOXD3 2 datasets
Motif DE_36h DE_36h-HOXD3_MA0912.2 8 bp overlap
Motif DE_60h DE_60h-HOXD3_MA0912.2 8 bp overlap
HOXD8 2 datasets
Motif DE_36h DE_36h-HOXD8_MA0910.3 7 bp overlap
Motif DE_60h DE_60h-HOXD8_MA0910.3 7 bp overlap
HOXD9 2 datasets
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Hmga1 1 dataset
Motif DE_36h DE_36h-Hmga1_MA2124.1 8 bp overlap
Hmx1 2 datasets
Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap
Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap
Hmx3 2 datasets
Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap
Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap
Hoxa13 1 dataset
Motif DE_36h DE_36h-Hoxa13_MA0650.4 8 bp overlap
ISL2 1 dataset
Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap
ISX 2 datasets
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
Motif DE_60h DE_60h-ISX_MA0654.2 6 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 310 bp overlap
KDM1A 4 datasets
ChIP A-549 ENCSR639GWS.KDM1A.A-549 243 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 190 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 390 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 263 bp overlap
LHX5 2 datasets
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
Motif DE_60h DE_60h-LHX5_MA1519.2 7 bp overlap
LHX6 2 datasets
Motif DE_36h DE_36h-LHX6_MA0658.2 8 bp overlap
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
LMX1A 2 datasets
Motif DE_36h DE_36h-LMX1A_MA0702.3 7 bp overlap
Motif DE_60h DE_60h-LMX1A_MA0702.3 7 bp overlap
LMX1B 2 datasets
Motif DE_36h DE_36h-LMX1B_MA0703.3 8 bp overlap
Motif DE_60h DE_60h-LMX1B_MA0703.3 8 bp overlap
Lhx1 2 datasets
Motif DE_36h DE_36h-Lhx1_MA1518.3 10 bp overlap
Motif DE_60h DE_60h-Lhx1_MA1518.3 10 bp overlap
Lhx4 2 datasets
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Motif DE_60h DE_60h-Lhx4_MA0704.2 6 bp overlap
Lhx8 2 datasets
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
Motif DE_60h DE_60h-Lhx8_MA0705.2 6 bp overlap
MEF2A 1 dataset
Motif DE_36h DE_36h-MEF2A_MA0052.5 10 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEOX1 2 datasets
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
Motif DE_60h DE_60h-MEOX1_MA0661.2 7 bp overlap
MEOX2 2 datasets
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
Motif DE_60h DE_60h-MEOX2_MA0706.2 7 bp overlap
MIXL1 2 datasets
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
Motif DE_60h DE_60h-MIXL1_MA0662.2 6 bp overlap
MNX1 2 datasets
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
Motif DE_60h DE_60h-MNX1_MA0707.3 6 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
Mecom 1 dataset
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
NKX2-3 1 dataset
Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap
NKX6-1 2 datasets
Motif DE_36h DE_36h-NKX6-1_MA0674.2 7 bp overlap
Motif DE_60h DE_60h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 2 datasets
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
Motif DE_60h DE_60h-NKX6-2_MA0675.2 6 bp overlap
NOTO 2 datasets
Motif DE_36h DE_36h-NOTO_MA0710.2 7 bp overlap
Motif DE_60h DE_60h-NOTO_MA0710.2 7 bp overlap
Nkx3-1 1 dataset
Motif DE_36h DE_36h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap
PBX3 1 dataset
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
PDX1 2 datasets
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
Motif DE_60h DE_60h-PDX1_MA0132.3 6 bp overlap
PGR 6 datasets
ChIP T-47D GSE31129.PGR.T-47D 139 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 139 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 173 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 107 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 100 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 143 bp overlap
PKNOX2 1 dataset
Motif DE_36h DE_36h-PKNOX2_MA0783.1 12 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_60h DE_60h-POU2F1SOX2_MA1962.1 17 bp overlap
POU4F2 2 datasets
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
Motif DE_60h DE_60h-POU4F2_MA0683.2 15 bp overlap
POU6F1 2 datasets
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
Motif DE_60h DE_60h-POU6F1_MA0628.2 6 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 326 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 281 bp overlap
PRRX1 2 datasets
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
Motif DE_60h DE_60h-PRRX1_MA0716.2 6 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
RAX2 2 datasets
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
Motif DE_60h DE_60h-RAX2_MA0717.2 6 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 376 bp overlap
ChIP K562 ENCFF248CGR 361 bp overlap
ChIP K562 ENCFF957ORK 361 bp overlap
Rarg 1 dataset
Motif DE_36h DE_36h-Rarg_MA0859.2 15 bp overlap
Rhox11 2 datasets
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
SATB1 1 dataset
Motif DE_36h DE_36h-SATB1_MA1963.2 7 bp overlap
SHOX 2 datasets
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
Motif DE_60h DE_60h-SHOX_MA0630.2 6 bp overlap
SIX2 1 dataset
Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap
SMAD2 3 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 235 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 403 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 352 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 403 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 403 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 164 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 270 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 54 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 337 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 329 bp overlap
Shox2 2 datasets
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
Motif DE_60h DE_60h-Shox2_MA0720.2 6 bp overlap
TBX1 1 dataset
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
TBX3 1 dataset
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
TGIF1 1 dataset
Motif DE_36h DE_36h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_36h DE_36h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_36h DE_36h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_36h DE_36h-TGIF2LY_MA1572.1 12 bp overlap
TLX2 2 datasets
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
Motif DE_60h DE_60h-TLX2_MA1577.2 6 bp overlap
UNCX 2 datasets
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
Motif DE_60h DE_60h-UNCX_MA0721.2 6 bp overlap
VAX1 2 datasets
Motif DE_36h DE_36h-VAX1_MA0722.2 7 bp overlap
Motif DE_60h DE_60h-VAX1_MA0722.2 7 bp overlap
VAX2 2 datasets
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
Motif DE_60h DE_60h-VAX2_MA0723.3 6 bp overlap
VSX1 2 datasets
Motif DE_36h DE_36h-VSX1_MA0725.2 7 bp overlap
Motif DE_60h DE_60h-VSX1_MA0725.2 7 bp overlap
VSX2 2 datasets
Motif DE_36h DE_36h-VSX2_MA0726.2 7 bp overlap
Motif DE_60h DE_60h-VSX2_MA0726.2 7 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZMYM3 1 dataset
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 169 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF547 2 datasets
Motif DE_36h DE_36h-ZNF547_MA2334.1 13 bp overlap
Motif DE_60h DE_60h-ZNF547_MA2334.1 13 bp overlap
ZNF558 1 dataset
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 204 bp overlap
ChIP HepG2 ENCFF490FFQ 343 bp overlap
ZNF667 2 datasets
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
ZNF8 1 dataset
Motif DE_36h DE_36h-ZNF8_MA1718.1 20 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 171 bp overlap
mix-a 2 datasets
Motif DE_36h DE_36h-mix-a_MA0621.2 7 bp overlap
Motif DE_60h DE_60h-mix-a_MA0621.2 7 bp overlap
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