chr10 : 30,080,742 30,081,590
848 bp 64 TFs 2 linked genes
This 848 bp open chromatin element is linked to JCAD and MTPAP and is bound by 64 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
JCAD 21.5 kb Distal Multiome
MTPAP 293.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:30,075,742 – 30,086,590
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 172 bp overlap
BRD3 1 dataset
ChIP HUVEC-C GSE60171.BRD3.HUVEC-C 150 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 164 bp overlap
CTCF 5 datasets
Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 155 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 155 bp overlap
ChIP cardiac_right-atrium-auricular-region ENCSR066GBX.CTCF.cardiac_right-atrium-auricular-region 174 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DPRX 1 dataset
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 169 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 55 bp overlap
EOMES 2 datasets
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 363 bp overlap
ESR1 1 dataset
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 221 bp overlap
FOXA1 3 datasets
ChIP liver ERP002306.FOXA1.liver 159 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 398 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 299 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 753 bp overlap
ChIP DE DE-FOXA2-2 724 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 217 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 756 bp overlap
ChIP DE DE-GATA4-2 848 bp overlap
ChIP foregut GSE117136.GATA4.foregut 517 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 663 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 501 bp overlap
GATA6 8 datasets
ChIP AGS GSE51705.GATA6.AGS 284 bp overlap
ChIP DE DE-GATA6-1 644 bp overlap
ChIP DE DE-GATA6-2 821 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 739 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 548 bp overlap
ChIP foregut GSE117136.GATA6.foregut 531 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 447 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 483 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
HAND2 4 datasets
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HNF4A 2 datasets
ChIP liver ENCFF354NRH 163 bp overlap
ChIP liver ERP002306.HNF4A.liver 150 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 215 bp overlap
Hoxd13 1 dataset
Motif DE_60h DE_60h-Hoxd13_MA0909.4 7 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 165 bp overlap
NEUROD1 2 datasets
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_72h DE_72h-NEUROD1_MA1109.2 8 bp overlap
Neurod2 2 datasets
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
Nr2e3 2 datasets
Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap
Motif DE_72h DE_72h-Nr2e3_MA0164.2 6 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 207 bp overlap
PAX6 2 datasets
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
Motif DE_72h DE_72h-PAX6_MA0069.1 14 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 194 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 352 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Ptf1A 2 datasets
Motif DE_60h DE_60h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
REL 1 dataset
Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
RUNX3 2 datasets
Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap
Motif DE_72h DE_72h-RUNX3_MA0684.3 8 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 262 bp overlap
Rarg 1 dataset
Motif DE_60h DE_60h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 526 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 421 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 384 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 416 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 565 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 155 bp overlap
STAT3 1 dataset
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 233 bp overlap
TBR1 1 dataset
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TWIST1 2 datasets
Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap
Motif DE_72h DE_72h-TWIST1_MA1123.3 8 bp overlap
Tbx6 1 dataset
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
ZNF354A 2 datasets
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF786 1 dataset
ChIP HEK293T GSE78099.ZNF786.HEK293T 137 bp overlap
ZNF8 1 dataset
Motif DE_60h DE_60h-ZNF8_MA1718.1 20 bp overlap
Zfp809 1 dataset
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap