chr10 : 17,021,698 17,022,015
317 bp 60 TFs 0 linked genes
This 317 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:17,016,698 – 17,027,015
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 236 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 296 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 233 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 314 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 317 bp overlap
CRY1 1 dataset
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 202 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF274GAT 253 bp overlap
ChIP BLaER1 ENCFF346MCV 317 bp overlap
ChIP BLaER1 ENCFF896HSY 198 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
FOXA2 3 datasets
ChIP PANC-1 GSE119930.FOXA2.PANC-1 230 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 251 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 308 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 187 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 317 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 217 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000BNR.HDAC2.WA01 156 bp overlap
HIF1A 2 datasets
ChIP U2OS_DMSO GSE85096.HIF1A.U2OS_DMSO 241 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 157 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 275 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 311 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap
MYC 1 dataset
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 86 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
NANOG 8 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 317 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 271 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 279 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 317 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 265 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 246 bp overlap
ChIP hESC GSE20650.NANOG.hESC 218 bp overlap
ChIP hESC GSE18292.NANOG.hESC 111 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 208 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PAX6 1 dataset
Motif DE_12h DE_12h-PAX6_MA0069.1 14 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 149 bp overlap
PBX2 1 dataset
Motif DE_12h DE_12h-PBX2_MA1113.3 9 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 197 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 265 bp overlap
POU5F1 5 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 317 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 302 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 263 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 306 bp overlap
SMARCA4 6 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 317 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 144 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 317 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCA4.TTC-549_NoDox 229 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 295 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 317 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 268 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 239 bp overlap
SMARCC1 4 datasets
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 161 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 317 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 258 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 317 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 317 bp overlap
ChIP hESC GSE18292.SOX2.hESC 97 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 192 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 186 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 189 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 314 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 195 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 164 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 70 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 154 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 263 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap