chr9 : 107,440,269 107,440,475
206 bp 64 TFs 0 linked genes
This 206 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:107,435,269 – 107,445,475
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 90 bp overlap
AR 5 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 206 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 206 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 206 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 202 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 64 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 206 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 206 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 181 bp overlap
BCL11A 1 dataset
ChIP HEK293 ENCFF294OHB 73 bp overlap
BRD4 6 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 121 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 113 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 206 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 163 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 131 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 206 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 201 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 154 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 179 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 174 bp overlap
ERG 2 datasets
ChIP VCaP GSE28950.ERG.VCaP 147 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 104 bp overlap
ESR1 10 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 119 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 63 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 142 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 206 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 80 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 206 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 118 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 123 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 82 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 157 bp overlap
FOXA1 6 datasets
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 144 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 193 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 206 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 197 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 206 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 145 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 206 bp overlap
ChIP DE DE-FOXA2-2 193 bp overlap
GABPA 3 datasets
ChIP VCaP GSE49091.GABPA.VCaP 206 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 113 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 109 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 206 bp overlap
ChIP DE DE-GATA4-2 206 bp overlap
ChIP foregut GSE117136.GATA4.foregut 206 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 206 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 206 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 206 bp overlap
ChIP DE DE-GATA6-2 206 bp overlap
ChIP foregut GSE117136.GATA6.foregut 206 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 206 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 206 bp overlap
HDAC2 2 datasets
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 201 bp overlap
ChIP VCaP_ETOH GSE28950.HDAC2.VCaP_ETOH 168 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-N 98 bp overlap
HOXB13 6 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 123 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 55 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 116 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 69 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 148 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 94 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 92 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 83 bp overlap
JUN 1 dataset
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 109 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCFF326EGX 86 bp overlap
KLF17 3 datasets
ChIP HEK293 ENCFF658MHR 181 bp overlap
ChIP HEK293 ENCFF658MHR 206 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 206 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 170 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 110 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 186 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 184 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 206 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 164 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 143 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 206 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 206 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 154 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 134 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 103 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 89 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 81 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 137 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 206 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 125 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 188 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 159 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 206 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 195 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 206 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 69 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 206 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 205 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 181 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 177 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 76 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 206 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 76 bp overlap
TSHZ1 1 dataset
ChIP HEK293 ENCFF893BGV 71 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 179 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 206 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 94 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 206 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 169 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 206 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 187 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 82 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 132 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 67 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 206 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 206 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 147 bp overlap
ZNF639 1 dataset
ChIP HEK293 ENCFF971ZNH 206 bp overlap
ZSCAN23 1 dataset
ChIP HEK293 ENCFF127TFV 75 bp overlap