chr9 : 91,572,131 91,572,458
327 bp 76 TFs 0 linked genes
This 327 bp open chromatin element has no linked target genes and is bound by 76 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:91,567,131 – 91,577,458
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
76 transcription factors
Source
Cell type
ATF7 1 dataset
Motif DE_72h DE_72h-ATF7_MA0834.2 10 bp overlap
BACH2 1 dataset
Motif DE_72h DE_72h-BACH2_MA1470.2 19 bp overlap
BRD4 2 datasets
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 119 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 319 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 241 bp overlap
CTCF 16 datasets
ChIP HAP1 GSE152721.CTCF.HAP1 248 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 175 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 202 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 178 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 327 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 287 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 265 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 297 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 179 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 236 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 202 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 95 bp overlap
ChIP gastroesophageal sphincter ENCFF582GAX 233 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 153 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 216 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 270 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 245 bp overlap
Creb5 1 dataset
Motif DE_72h DE_72h-Creb5_MA0840.2 10 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 237 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 280 bp overlap
DUX4 2 datasets
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 176 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 261 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 209 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 162 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 162 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 309 bp overlap
FOS 2 datasets
Motif DE_72h DE_72h-FOS_MA1951.2 13 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 113 bp overlap
FOS::JUN 1 dataset
Motif DE_72h DE_72h-FOSJUN_MA1126.2 10 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 278 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 327 bp overlap
ChIP DE DE-FOXA2-2 327 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 161 bp overlap
FOXF1 3 datasets
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 171 bp overlap
ChIP GIST48 GSE106624.FOXF1.GIST48 327 bp overlap
ChIP GIST48_siETV1 GSE106624.FOXF1.GIST48_siETV1 273 bp overlap
FOXM1 2 datasets
ChIP Ishikawa ENCFF578VDD 327 bp overlap
ChIP Ishikawa ENCSR000BUS.FOXM1.Ishikawa 232 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 327 bp overlap
ChIP DE DE-GATA4-2 327 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 181 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 193 bp overlap
ChIP foregut GSE117136.GATA4.foregut 327 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 327 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 327 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 327 bp overlap
ChIP DE DE-GATA6-2 327 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 327 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 304 bp overlap
ChIP foregut GSE117136.GATA6.foregut 327 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 293 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 304 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 277 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 140 bp overlap
HSF1 3 datasets
ChIP BPE_HEAT GSE38901.HSF1.BPE_HEAT 138 bp overlap
ChIP MCF-10A_HEAT GSE38901.HSF1.MCF-10A_HEAT 122 bp overlap
ChIP hTERT-HME1_HEAT GSE38901.HSF1.hTERT-HME1_HEAT 183 bp overlap
JDP2 1 dataset
Motif DE_72h DE_72h-JDP2_MA0656.2 10 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 72 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 99 bp overlap
JUNB 1 dataset
Motif DE_72h DE_72h-JUNB_MA1140.3 11 bp overlap
KLF5 2 datasets
ChIP HCC95 GSE88976.KLF5.HCC95 277 bp overlap
ChIP HCC95_E419Q GSE88976.KLF5.HCC95_E419Q 230 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 233 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 127 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 214 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 168 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 327 bp overlap
MYC 2 datasets
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 234 bp overlap
ChIP MCF-10A ENCSR000DOM.MYC.MCF-10A 180 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 111 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 123 bp overlap
Msgn1 1 dataset
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 183 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 241 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 229 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 229 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 292 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 202 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 124 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 247 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 311 bp overlap
PHOX2A 1 dataset
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 327 bp overlap
POLR2A 7 datasets
ChIP esophagus muscularis mucosa ENCFF759BBR 306 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 301 bp overlap
ChIP prostate gland ENCFF881OMH 294 bp overlap
ChIP stomach ENCFF278MYS 193 bp overlap
ChIP stomach ENCFF607ZPU 255 bp overlap
ChIP stomach ENCFF820WZN 176 bp overlap
ChIP vagina ENCFF305NWS 147 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 327 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 327 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 327 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 327 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 315 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 327 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 320 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 290 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 327 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 273 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 300 bp overlap
SMARCC1 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 285 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 198 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 277 bp overlap
ChIP BT-16_Dox GSE71504.SMARCC1.BT-16_Dox 162 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 327 bp overlap
SOX13 1 dataset
Motif DE_72h DE_72h-SOX13_MA1120.2 7 bp overlap
SOX14 1 dataset
Motif DE_72h DE_72h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 202 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 275 bp overlap
SOX2 7 datasets
Motif DE_72h DE_72h-SOX2_MA0143.5 7 bp overlap
ChIP HCC2814 GSE137459.SOX2.HCC2814 219 bp overlap
ChIP HCC95 GSE137459.SOX2.HCC95 327 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 245 bp overlap
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 323 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 314 bp overlap
ChIP TT GSE46837.SOX2.TT 205 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_72h DE_72h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_72h DE_72h-SOX9_MA0077.2 8 bp overlap
SS18 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 327 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 229 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 273 bp overlap
STAT3 4 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 175 bp overlap
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 148 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 174 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 188 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_72h DE_72h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 131 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 140 bp overlap
TEF 1 dataset
Motif DE_72h DE_72h-TEF_MA0843.2 10 bp overlap
TP63 5 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 235 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 176 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 217 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 164 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 167 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 265 bp overlap
ZBTB12 1 dataset
Motif DE_72h DE_72h-ZBTB12_MA1649.2 7 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 130 bp overlap