chr9 : 87,785,345 87,785,878
533 bp 65 TFs 2 linked genes
This 533 bp open chromatin element is linked to CTSL and DAPK1 and is bound by 65 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CTSL 59.5 kb Distal Multiome
DAPK1 287.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:87,780,345 – 87,790,878
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 219 bp overlap
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 482 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 311 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 158 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 466 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF902MYN 422 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 285 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 281 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 170 bp overlap
E2F6 1 dataset
ChIP K562 ENCFF136LTS 325 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 317 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 533 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 423 bp overlap
ChIP HEK293 ENCFF528YED 345 bp overlap
FOXA1 14 datasets
ChIP HepG2 ENCFF207NVJ 168 bp overlap
ChIP HepG2 ENCFF361KNY 233 bp overlap
ChIP HepG2 ENCFF740VZW 231 bp overlap
ChIP K562 ENCFF954GIJ 243 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 171 bp overlap
ChIP LNCaP_GSK GSE148926.FOXA1.LNCaP_GSK 201 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 157 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 125 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 228 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 165 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 158 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 118 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 83 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 128 bp overlap
FOXA2 7 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 106 bp overlap
ChIP DE DE-FOXA2-1 533 bp overlap
ChIP DE DE-FOXA2-2 533 bp overlap
ChIP HepG2 ENCFF533COJ 150 bp overlap
ChIP HepG2 ENCFF570ABM 254 bp overlap
ChIP HepG2 ENCFF894AYY 146 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 96 bp overlap
FOXA3 3 datasets
ChIP HepG2 ENCFF005KGL 318 bp overlap
ChIP K562 ENCFF348SOM 179 bp overlap
ChIP K562 ENCFF781VSC 298 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF996TSW 317 bp overlap
GATA2 3 datasets
ChIP K562 ENCFF088XQT 411 bp overlap
ChIP K562 ENCFF544PCK 244 bp overlap
ChIP K562 ENCFF830LLA 533 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 533 bp overlap
ChIP DE DE-GATA4-2 533 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 533 bp overlap
ChIP DE DE-GATA6-2 533 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 256 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 533 bp overlap
ChIP foregut GSE117136.GATA6.foregut 259 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF928TKZ 347 bp overlap
HDAC2 1 dataset
ChIP K562 ENCFF744ALD 387 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 493 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 461 bp overlap
KDM1A 2 datasets
ChIP K562 ENCFF934ZRG 501 bp overlap
ChIP K562 ENCFF934ZRG 316 bp overlap
L3MBTL2 1 dataset
ChIP K562 ENCFF320EQC 319 bp overlap
MAX 3 datasets
ChIP K562 ENCFF110LJS 311 bp overlap
ChIP K562 ENCFF398VJM 368 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
MAZ 1 dataset
ChIP K562 ENCFF333ZIV 371 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 533 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 283 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 533 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 226 bp overlap
MYC 1 dataset
ChIP K562 ENCFF640IEK 157 bp overlap
NCOR1 2 datasets
ChIP K562 ENCFF788MPU 293 bp overlap
ChIP K562 ENCFF866HRM 159 bp overlap
NFIC 2 datasets
ChIP K562 ENCFF167YID 319 bp overlap
ChIP K562 ENCFF167YID 457 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 391 bp overlap
NR3C1 1 dataset
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 56 bp overlap
PITX1 1 dataset
ChIP HepG2 ENCFF468QTQ 353 bp overlap
POLR2A 2 datasets
ChIP K562 ENCFF514URW 405 bp overlap
ChIP prostate gland ENCFF881OMH 200 bp overlap
RBBP5 1 dataset
ChIP K562 ENCFF070CVK 326 bp overlap
RNF2 2 datasets
ChIP K562 ENCFF061ATI 445 bp overlap
ChIP K562 ENCFF653BQJ 512 bp overlap
RUNX1 1 dataset
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 205 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 96 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 129 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 419 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 513 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 523 bp overlap
SMARCA4 1 dataset
ChIP K562 ENCFF506JCB 494 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 310 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 321 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 433 bp overlap
SPI1 4 datasets
ChIP HL-60 ENCFF645GBT 240 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 108 bp overlap
ChIP K562 ENCFF410ORC 185 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 341 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 115 bp overlap
ChIP K562 ENCFF620GMX 131 bp overlap
ChIP K562 ENCFF661CCK 277 bp overlap
TCF12 2 datasets
ChIP K562 ENCFF909RDY 397 bp overlap
ChIP K562 ENCFF931DJY 154 bp overlap
TCF3 2 datasets
ChIP K562 ENCFF319QZT 381 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 269 bp overlap
TCF7 1 dataset
ChIP HepG2 ENCFF628OFQ 333 bp overlap
TEAD4 2 datasets
ChIP K562 ENCFF673NIK 279 bp overlap
ChIP K562 ENCFF673NIK 319 bp overlap
TP63 2 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 225 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 180 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 533 bp overlap
ZBTB11 2 datasets
ChIP K562 ENCFF215OUF 533 bp overlap
ChIP K562 ENCFF215OUF 533 bp overlap
ZFP1 1 dataset
ChIP K562 ENCFF777OLK 211 bp overlap
ZFX 4 datasets
ChIP K562 ENCFF169LZT 229 bp overlap
ChIP K562 ENCFF169LZT 436 bp overlap
ChIP K562 ENCFF536AJO 466 bp overlap
ChIP K562 ENCFF536AJO 533 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 440 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 533 bp overlap
ZNF281 2 datasets
ChIP K562 ENCFF594VNM 177 bp overlap
ChIP K562 ENCFF594VNM 160 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 346 bp overlap