chr9 : 12,771,858 – 12,772,116
258 bp 49 TFs 1 linked gene
This 258 bp open chromatin element is linked to LURAP1L and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LURAP1L 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:12,766,858 – 12,777,116
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 246 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 117 bp overlap
ChIP endometrial-stromal-cell GSE119432.AR.endometrial-stromal-cell 120 bp overlap
ChIP epididymis_HEE_R1881 GSE109061.AR.epididymis_HEE_R1881 142 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 56 bp overlap
BATF3 2 datasets
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 139 bp overlap
ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 161 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 145 bp overlap
ChIP IMR-90 ENCFF312JYK 84 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 174 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 151 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 140 bp overlap
BRD4 6 datasets
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 148 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 174 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 206 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 156 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 136 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 195 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 198 bp overlap
CREBBP 2 datasets
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 258 bp overlap
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 205 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 217 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 200 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 200 bp overlap
EP300 1 dataset
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 82 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 125 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 207 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 94 bp overlap
FOXA1 7 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 258 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 258 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 175 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 67 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 258 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 150 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 191 bp overlap
FOXA2 6 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 197 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 258 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 94 bp overlap
ChIP DE DE-FOXA2-1 221 bp overlap
ChIP DE DE-FOXA2-2 227 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 81 bp overlap
FOXL2 6 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 258 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 258 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 258 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 258 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 258 bp overlap
ChIP SVOG-3e_no-DOX-mut GSE126171.FOXL2.SVOG-3e_no-DOX-mut 144 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 84 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-1 170 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 231 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 193 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE96652.HOXB13.LNCaP 86 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 217 bp overlap
JUN 3 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 63 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 71 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 258 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 159 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 119 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 225 bp overlap
MYC 1 dataset
ChIP MCF-10A ENCSR000DOM.MYC.MCF-10A 104 bp overlap
MYCN 1 dataset
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 75 bp overlap
NR3C1 4 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 217 bp overlap
ChIP HCC1937 GSE152203.NR3C1.HCC1937 159 bp overlap
ChIP HCC70 GSE152203.NR3C1.HCC70 182 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 94 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 258 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF095BJW 189 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 249 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 238 bp overlap
RELA 7 datasets
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 156 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 162 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 72 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 55 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 142 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 97 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 166 bp overlap
SMAD2-3 7 datasets
ChIP HGrC1_C134W GSE138496.SMAD2-3.HGrC1_C134W 258 bp overlap
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 258 bp overlap
ChIP HGrC1_C134W-TGF_SMAD4-KO GSE138496.SMAD2-3.HGrC1_C134W-TGF_SMAD4-KO 204 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD2-3.HGrC1_C134W-TGF_parental 214 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 258 bp overlap
ChIP KGN_C134W GSE138496.SMAD2-3.KGN_C134W 140 bp overlap
ChIP KGN_TGF GSE138496.SMAD2-3.KGN_TGF 258 bp overlap
SMAD3 6 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 258 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 258 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 218 bp overlap
ChIP HMLE_TGFb GSE104760.SMAD3.HMLE_TGFb 157 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 201 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 147 bp overlap
SMAD4 6 datasets
ChIP HGrC1_C134W GSE138496.SMAD4.HGrC1_C134W 203 bp overlap
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 212 bp overlap
ChIP HGrC1_C134W-TGF_SMAD2-3-KO GSE138496.SMAD4.HGrC1_C134W-TGF_SMAD2-3-KO 156 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.SMAD4.HGrC1_C134W-TGF_parental 213 bp overlap
ChIP HGrC1_WT-TGF GSE138496.SMAD4.HGrC1_WT-TGF 177 bp overlap
ChIP KGN_TGF GSE138496.SMAD4.KGN_TGF 167 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 182 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 138 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 235 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 129 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 150 bp overlap
SOX4 1 dataset
ChIP HCC1954_TGFb GSE104760.SOX4.HCC1954_TGFb 159 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 236 bp overlap
STAT3 6 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 175 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 237 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 206 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 139 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 236 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 187 bp overlap
TEAD1 4 datasets
ChIP CCLP1 GSE62272.TEAD1.CCLP1 167 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 258 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 181 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 258 bp overlap
TEAD4 7 datasets
ChIP HUCCT1 GSE68296.TEAD4.HUCCT1 161 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 181 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 258 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 159 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 110 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 125 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 60 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 160 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 148 bp overlap
TP63 2 datasets
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 172 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 172 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 191 bp overlap
YAP1 1 dataset
ChIP MCF-10A GSE97972.YAP1.MCF-10A 93 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 256 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 204 bp overlap
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