chr8 : 85,446,108 – 85,446,289
181 bp 46 TFs 1 linked gene
This 181 bp open chromatin element is linked to CA3 and is bound by 46 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CA3 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:85,441,108 – 85,451,289
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
AR 3 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 136 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 117 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 181 bp overlap
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 115 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 181 bp overlap
BRD4 1 dataset
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-075 168 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 128 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 87 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 139 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 77 bp overlap
CTCF 27 datasets
ChIP GM23338 ENCFF772DML 159 bp overlap
ChIP H1 ENCFF230QSV 112 bp overlap
ChIP H1 ENCFF414GZI 138 bp overlap
ChIP H1 ENCFF764RHO 181 bp overlap
ChIP H9 ENCFF152GTF 181 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 178 bp overlap
ChIP MCF-7 ENCFF414SZG 51 bp overlap
ChIP MCF-7 ENCFF424NQR 158 bp overlap
ChIP MCF-7 ENCFF844STM 158 bp overlap
ChIP MCF-7 ENCFF954TUV 150 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 89 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 94 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 154 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 104 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 121 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 181 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 181 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 181 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 166 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 93 bp overlap
ChIP endodermal cell ENCFF471YCZ 181 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 60 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 119 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 181 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 119 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 151 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 79 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 115 bp overlap
ESR1 14 datasets
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 176 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 181 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 181 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 116 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 143 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 181 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 140 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 181 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 174 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 181 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 181 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 181 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 168 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 170 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 181 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 179 bp overlap
ESR1_Y537S 1 dataset
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 167 bp overlap
ESR2 2 datasets
ChIP MDA-MB-231_LY500307 GSE108979.ESR2.MDA-MB-231_LY500307 178 bp overlap
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 181 bp overlap
EZH1 1 dataset
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 98 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 181 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 181 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 181 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 150 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 181 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 181 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 181 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 162 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 55 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 181 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 181 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCFF144ZFZ 181 bp overlap
MYC 2 datasets
ChIP MCF-7 ENCFF394LGD 181 bp overlap
ChIP MCF-7 ENCFF767RTQ 181 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 181 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 129 bp overlap
POLR2A 1 dataset
ChIP MCF-7 ENCFF309IKZ 181 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 115 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 156 bp overlap
RAD21 5 datasets
ChIP H1 ENCFF698EWO 181 bp overlap
ChIP H1 ENCFF967OJF 180 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 159 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 145 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 165 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 158 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 104 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 128 bp overlap
STAT3 3 datasets
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 181 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 124 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 150 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 181 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 164 bp overlap
TP53 2 datasets
ChIP MCF-7_7-5h_IR_10Gy_Nutlin GSE100099.TP53.MCF-7_7-5h_IR_10Gy_Nutlin 148 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 181 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 85 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 180 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 104 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 116 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 181 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 165 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 181 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 162 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 132 bp overlap
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