chr7 : 148,567,545 – 148,567,885

340 bp 81 TFs 0 linked genes

This 340 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

81 transcription factors

ASCL1 1 dataset

ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 96 bp overlap

ATF2 4 datasets

Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap

ChIP H1 ENCFF295GZO 340 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 107 bp overlap

ChIP WA01 ENCSR000BQU.ATF2.WA01 141 bp overlap

BAP1 1 dataset

ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 161 bp overlap

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BCL11A 3 datasets

ChIP H1 ENCFF833IPY 145 bp overlap

ChIP WA01 ENCSR000BIP.BCL11A.WA01 247 bp overlap

ChIP WA01 ENCSR000BMJ.BCL11A.WA01 233 bp overlap

BRD4 1 dataset

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 61 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CHD7 2 datasets

ChIP H1 ENCFF126NLU 314 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 326 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 155 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

EBF3 1 dataset

Motif DE_60h DE_60h-EBF3_MA1637.2 9 bp overlap

EN2 1 dataset

Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 340 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 145 bp overlap

ERG 3 datasets

ChIP VCaP GSE49091.ERG.VCaP 138 bp overlap

ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 153 bp overlap

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 181 bp overlap

EZH2 1 dataset

ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 121 bp overlap

Ebf2 1 dataset

Motif DE_60h DE_60h-Ebf2_MA1604.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 340 bp overlap

ChIP DE DE-FOXA2-2 340 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 340 bp overlap

ChIP DE DE-GATA4-2 340 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 340 bp overlap

ChIP DE DE-GATA6-2 340 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 274 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 340 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 316 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 311 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 311 bp overlap

GBX1 1 dataset

Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HNF4A 1 dataset

Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap

HNF4G 1 dataset

Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

LBX1 1 dataset

Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

LHX9 1 dataset

Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap

LIN54 1 dataset

Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap

MAX 3 datasets

ChIP H1 ENCFF601FOM 273 bp overlap

ChIP H1 ENCFF914VQY 296 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 289 bp overlap

MBD3 1 dataset

ChIP HEK293T GSE102945.MBD3.HEK293T 75 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 323 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NANOG 10 datasets

ChIP H1 ENCFF747ZPQ 116 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 340 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 340 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 338 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 340 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 340 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 340 bp overlap

ChIP hESC GSE18292.NANOG.hESC 98 bp overlap

ChIP hESC GSE20650.NANOG.hESC 292 bp overlap

ChIP hESC GSE18292.NANOG.hESC 142 bp overlap

NR2C1 1 dataset

Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

Nr1H2 1 dataset

Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

OTX2 2 datasets

Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap

ChIP WTC11 ENCFF634NAO 245 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 331 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 259 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 178 bp overlap

PPARA::RXRA 1 dataset

Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap

PPARG 1 dataset

Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap

PRRX2 1 dataset

Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap

Pparg::Rxra 1 dataset

Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

RBPJ 1 dataset

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

REL 1 dataset

Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

RORA 2 datasets

Motif DE_60h DE_60h-RORA_MA0071.1 10 bp overlap

Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap

RORB 1 dataset

Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap

RORC 1 dataset

Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 316 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 229 bp overlap

SOX10 1 dataset

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 298 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 334 bp overlap

SOX2 3 datasets

ChIP H9 GSE46837.SOX2.H9 190 bp overlap

ChIP hESC GSE18292.SOX2.hESC 102 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 274 bp overlap

SOX4 1 dataset

Motif DE_60h DE_60h-SOX4_MA0867.3 8 bp overlap

SP1 2 datasets

ChIP H1 ENCFF263FUH 288 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 271 bp overlap

Sox6 1 dataset

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 333 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 258 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 316 bp overlap

ZNF274 1 dataset

ChIP K562 ENCFF187RMG 206 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 332 bp overlap