chr7 : 103,597,491 103,598,216
725 bp 73 TFs 4 linked genes
This 725 bp open chromatin element is linked to 4 target genes and is bound by 73 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
SLC26A5 151.7 kb Distal Multiome
PSMC2 250.2 kb Distal Multiome
DNAJC2 253.0 kb Distal Multiome
PMPCB 300.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:103,592,491 – 103,603,216
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ATF6 2 datasets
Motif DE_36h DE_36h-ATF6_MA1466.2 13 bp overlap
Motif DE_48h DE_48h-ATF6_MA1466.2 13 bp overlap
BARX2 1 dataset
Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap
CREB3 2 datasets
Motif DE_36h DE_36h-CREB3_MA0638.2 12 bp overlap
Motif DE_48h DE_48h-CREB3_MA0638.2 12 bp overlap
CREB3L1 2 datasets
Motif DE_36h DE_36h-CREB3L1_MA0839.2 13 bp overlap
Motif DE_48h DE_48h-CREB3L1_MA0839.2 13 bp overlap
CTCF 4 datasets
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 197 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 125 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 361 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 347 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 542 bp overlap
ESR1 3 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 140 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 152 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 125 bp overlap
EZH2 2 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 456 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 473 bp overlap
FOS 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 251 bp overlap
FOXA1 1 dataset
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 320 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 232 bp overlap
ChIP DE DE-FOXA2-1 573 bp overlap
ChIP DE DE-FOXA2-2 527 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 341 bp overlap
ChIP DE DE-GATA4-2 470 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 496 bp overlap
ChIP DE DE-GATA6-2 408 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 395 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 272 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 435 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 411 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 344 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 276 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H_bioMerck GSE116344.HDAC2.RH4_DMSO-6H_bioMerck 158 bp overlap
Hmx1 2 datasets
Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap
Motif DE_48h DE_48h-Hmx1_MA0896.2 9 bp overlap
Hmx3 2 datasets
Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap
Motif DE_48h DE_48h-Hmx3_MA0898.2 9 bp overlap
IKZF1 1 dataset
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
Isl1 1 dataset
Motif DE_36h DE_36h-Isl1_MA1608.2 7 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 134 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 362 bp overlap
MEIS1 4 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 376 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 444 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 235 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 250 bp overlap
NR2C1 1 dataset
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
OGG1 1 dataset
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 219 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 200 bp overlap
RAD21 1 dataset
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 162 bp overlap
SATB1 1 dataset
ChIP MCF-10A_N-term_CUT1 GSE123292.SATB1.MCF-10A_N-term_CUT1 220 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 636 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 605 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 639 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 622 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 649 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 586 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 619 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 642 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 168 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 336 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 56 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 620 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 395 bp overlap
SOX14 1 dataset
Motif DE_36h DE_36h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 377 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 428 bp overlap
SOX18 1 dataset
Motif DE_36h DE_36h-SOX18_MA1563.2 8 bp overlap
SOX4 1 dataset
Motif DE_36h DE_36h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_36h DE_36h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_36h DE_36h-SOX9_MA0077.2 8 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 649 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 137 bp overlap
Sox11 1 dataset
Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 485 bp overlap
TBX1 2 datasets
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 2 datasets
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
TBX3 2 datasets
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Yy1 1 dataset
Motif DE_36h DE_36h-Yy1_MA0095.4 8 bp overlap
ZNF418 1 dataset
Motif DE_36h DE_36h-ZNF418_MA1980.1 15 bp overlap
ZNF558 2 datasets
Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap