chr7 : 98,305,831 98,306,470
639 bp 55 TFs 4 linked genes
This 639 bp open chromatin element is linked to 4 target genes and is bound by 55 transcription factors.
Linked Genes
4 genes
Link type
Gene Expression Dist. to TSS Distance Link type
BRI3 53.8 kb Distal Multiome
TECPR1 54.0 kb Distal Multiome
BAIAP2L1 94.9 kb Distal Multiome+HiCAR
LMTK2 199.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:98,300,831 – 98,311,470
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 322 bp overlap
ATOH7 1 dataset
Motif DE_48h DE_48h-ATOH7_MA1468.1 10 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 289 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CDX2 2 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 186 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 293 bp overlap
CTCF 6 datasets
ChIP BE2C ENCFF757SRF 86 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 198 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 177 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 181 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 100 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 218 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF460KDD 124 bp overlap
ChIP BLaER1 ENCFF460KDD 371 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 639 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 139 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 138 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 138 bp overlap
ESR1 3 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 308 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 217 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 445 bp overlap
ETS1 2 datasets
ChIP K-562 ENCSR000BKQ.ETS1.K-562 187 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 148 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 286 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 203 bp overlap
ChIP DE DE-FOXA2-1 400 bp overlap
ChIP DE DE-FOXA2-2 434 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 299 bp overlap
GATA2 6 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 308 bp overlap
ChIP SH-SY5Y ENCFF485YIB 235 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 492 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 303 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 191 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 180 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 511 bp overlap
ChIP DE DE-GATA4-2 531 bp overlap
ChIP foregut GSE117136.GATA4.foregut 469 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 547 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 437 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 225 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 417 bp overlap
ChIP DE DE-GATA6-1 428 bp overlap
ChIP DE DE-GATA6-2 583 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 503 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 489 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 564 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 533 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 545 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 564 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 622 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 295 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 544 bp overlap
ChIP foregut GSE117136.GATA6.foregut 477 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 417 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 564 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 531 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 408 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 112 bp overlap
HNF4A 2 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 203 bp overlap
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 139 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 161 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 152 bp overlap
HSF1 4 datasets
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 479 bp overlap
ChIP MO91 GSE45852.HSF1.MO91 323 bp overlap
ChIP SK-BR-3 GSE38901.HSF1.SK-BR-3 193 bp overlap
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 102 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 59 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 325 bp overlap
MXI1 1 dataset
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 136 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 131 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 449 bp overlap
Msgn1 1 dataset
Motif DE_48h DE_48h-Msgn1_MA1524.3 10 bp overlap
NEUROG1 1 dataset
Motif DE_48h DE_48h-NEUROG1_MA0623.2 10 bp overlap
NEUROG2 1 dataset
Motif DE_48h DE_48h-NEUROG2_MA0669.1 10 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 191 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 152 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 52 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 383 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 534 bp overlap
POLR2A 4 datasets
ChIP spleen ENCFF446ZGT 310 bp overlap
ChIP spleen ENCFF706IUS 287 bp overlap
ChIP stomach ENCFF607ZPU 325 bp overlap
ChIP stomach ENCFF820WZN 345 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 159 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 303 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 428 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 382 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 308 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 126 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 263 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 369 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 526 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
TBX5 1 dataset
ChIP hiPSC GSE81585.TBX5.hiPSC 276 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 437 bp overlap
TFAP4 1 dataset
Motif DE_48h DE_48h-TFAP4_MA1570.1 10 bp overlap
THAP1 2 datasets
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
ChIP K-562 ENCSR000BNN.THAP1.K-562 265 bp overlap
ZNF16 1 dataset
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
ZNF528 1 dataset
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_48h DE_48h-ZNF530_MA1981.2 14 bp overlap