chr7 : 85,734,095 – 85,734,716

621 bp 73 TFs 0 linked genes

This 621 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

73 transcription factors

AR 4 datasets

ChIP LNCaP GSE80256.AR.LNCaP 238 bp overlap

ChIP MCF-7 GSE48930.AR.MCF-7 149 bp overlap

ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap

ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 81 bp overlap

BRD4 2 datasets

ChIP COLO-741 GSE73319.BRD4.COLO-741 429 bp overlap

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 265 bp overlap

CDK6 1 dataset

ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap

CEBPA 1 dataset

ChIP T-47D GSE132649.CEBPA.T-47D 201 bp overlap

CHD8 1 dataset

ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 179 bp overlap

CTCF 1 dataset

ChIP RH4 GSE83726.CTCF.RH4 153 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 305 bp overlap

DUX4 2 datasets

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 259 bp overlap

ESR1 3 datasets

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 308 bp overlap

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 617 bp overlap

ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 621 bp overlap

ESRRA 1 dataset

Motif DE_60h DE_60h-ESRRA_MA0592.4 9 bp overlap

ESRRB 1 dataset

Motif DE_60h DE_60h-ESRRB_MA0141.4 10 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

EZH2 1 dataset

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 58 bp overlap

Esrrg 1 dataset

Motif DE_60h DE_60h-Esrrg_MA0643.2 9 bp overlap

FIGLA 2 datasets

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOXA1 1 dataset

ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 72 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 508 bp overlap

ChIP DE DE-FOXA2-2 368 bp overlap

GATA1 1 dataset

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

GATA4 7 datasets

ChIP DE DE-GATA4-1 581 bp overlap

ChIP DE DE-GATA4-2 501 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 468 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 388 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 313 bp overlap

GATA5 2 datasets

Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap

Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 396 bp overlap

ChIP DE DE-GATA6-2 545 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap

ChIP foregut GSE117136.GATA6.foregut 396 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 349 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 345 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 262 bp overlap

GRHL2 1 dataset

ChIP LNCaP GSE80256.GRHL2.LNCaP 193 bp overlap

Gata3 2 datasets

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 227 bp overlap

HNF4A 2 datasets

ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 79 bp overlap

Motif DE_60h DE_60h-HNF4A_MA1494.2 14 bp overlap

HSF1 1 dataset

ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 206 bp overlap

MEIS1 1 dataset

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MSANTD3 2 datasets

Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap

Motif DE_72h DE_72h-MSANTD3_MA1523.2 7 bp overlap

MYOD1 3 datasets

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 242 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 163 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 98 bp overlap

MYOG 2 datasets

ChIP RH4 GSE83726.MYOG.RH4 83 bp overlap

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 200 bp overlap

Mecom 1 dataset

Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap

NCOA2 1 dataset

ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 161 bp overlap

NFYB 1 dataset

Motif DE_60h DE_60h-NFYB_MA0502.3 9 bp overlap

NR1H2::RXRA 1 dataset

Motif DE_60h DE_60h-NR1H2RXRA_MA0115.1 17 bp overlap

NR2C1 1 dataset

Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap

NR2F2 1 dataset

Motif DE_60h DE_60h-NR2F2_MA1111.2 7 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHE.NR3C1.A-549 182 bp overlap

NR4A1 1 dataset

Motif DE_60h DE_60h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_60h DE_60h-NR4A2_MA0160.3 8 bp overlap

NR5A1 1 dataset

Motif DE_60h DE_60h-NR5A1_MA1540.3 12 bp overlap

NRIP1 1 dataset

ChIP MCF-7 ERP005838.NRIP1.MCF-7 135 bp overlap

Nr1H2 1 dataset

Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap

Nr5A2 1 dataset

Motif DE_60h DE_60h-Nr5A2_MA0505.3 9 bp overlap

OSR1 1 dataset

Motif DE_60h DE_60h-OSR1_MA1542.2 8 bp overlap

OSR2 1 dataset

Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap

PAX3-FOXO1 2 datasets

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 278 bp overlap

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 211 bp overlap

PBX3 2 datasets

Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap

Motif DE_72h DE_72h-PBX3_MA1114.2 11 bp overlap

PGR 1 dataset

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 178 bp overlap

PHOX2A 1 dataset

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

PKNOX2 1 dataset

Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap

PROP1 1 dataset

Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap

Ppara 1 dataset

Motif DE_60h DE_60h-Ppara_MA2338.1 7 bp overlap

SIX2 1 dataset

Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 163 bp overlap

SNAI2 2 datasets

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 209 bp overlap

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 354 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 377 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 236 bp overlap

TGIF1 1 dataset

Motif DE_60h DE_60h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_60h DE_60h-TGIF2_MA0797.1 12 bp overlap

THRB 1 dataset

Motif DE_60h DE_60h-THRB_MA1575.2 17 bp overlap

TRPS1 2 datasets

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 205 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 329 bp overlap

ZEB1 2 datasets

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZNF16 1 dataset

Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap

ZNF24 2 datasets

Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap

Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap

ZNF454 1 dataset

Motif DE_60h DE_60h-ZNF454_MA1712.2 17 bp overlap

ZNF528 1 dataset

Motif DE_60h DE_60h-ZNF528_MA1597.1 17 bp overlap

ZNF558 1 dataset

Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap

ZNF667 2 datasets

Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap

Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap