chr7 : 30,479,551 – 30,480,064
513 bp 57 TFs 1 linked gene
This 513 bp open chromatin element is linked to NOD1 and is bound by 57 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
NOD1 915 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:30,474,551 – 30,485,064
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP GM12878 ENCFF006WWZ 77 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 54 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 101 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 68 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 102 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 140 bp overlap
BRD4 16 datasets
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 146 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 202 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 145 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 142 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 178 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 220 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 104 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 98 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 117 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 51 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 193 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 103 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 163 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 73 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 60 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 62 bp overlap
CDK8 2 datasets
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 114 bp overlap
ChIP SET-2 GSE65138.CDK8.SET-2 106 bp overlap
CDK9 1 dataset
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 102 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 59 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 216 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 54 bp overlap
ChIP GM12878 ENCFF813OXE 177 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 104 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 60 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 108 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 125 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 69 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 198 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 69 bp overlap
GATA3 5 datasets
ChIP Jurkat GSE76181.GATA3.Jurkat 100 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 107 bp overlap
ChIP SK-N-SH ENCFF040SSB 184 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 99 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 121 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 210 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 366 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 219 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 432 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 60 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 57 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 121 bp overlap
IRF1 14 datasets
ChIP AsPC-1 GSE141606.IRF1.AsPC-1 150 bp overlap
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 187 bp overlap
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 167 bp overlap
ChIP CD14_LPS GSE43036.IRF1.CD14_LPS 120 bp overlap
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 112 bp overlap
ChIP HAEC_TNFa_4h GSE89970.IRF1.HAEC_TNFa_4h 85 bp overlap
ChIP K-562 GSE129380.IRF1.K-562 148 bp overlap
ChIP K-562 ENCSR000EGL.IRF1.K-562 92 bp overlap
ChIP K-562 ENCSR000EGK.IRF1.K-562 59 bp overlap
ChIP K-562 ENCSR000EGU.IRF1.K-562 75 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 146 bp overlap
ChIP K562 ENCFF277KTJ 228 bp overlap
ChIP K562 ENCFF277KTJ 295 bp overlap
ChIP U-937 GSE142197.IRF1.U-937 71 bp overlap
IRF2 3 datasets
ChIP CD34_ADULT GSE70660.IRF2.CD34_ADULT 91 bp overlap
ChIP K-562 ENCSR376WCJ.IRF2.K-562 110 bp overlap
ChIP K562 ENCFF248LJZ 99 bp overlap
IRF4 4 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 109 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 64 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 64 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 193 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 207 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 397 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 498 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 226 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 53 bp overlap
KMT2A 1 dataset
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 103 bp overlap
MAX 3 datasets
ChIP P493-6 GSE36354.MAX.P493-6 95 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 110 bp overlap
ChIP liver ENCFF092GVW 71 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 226 bp overlap
MNT 1 dataset
ChIP K562 ENCFF342DNS 172 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 100 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 305 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 131 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF568JLK 221 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 140 bp overlap
PGR 2 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 157 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 99 bp overlap
POLR2A 4 datasets
ChIP esophagus muscularis mucosa ENCFF759BBR 227 bp overlap
ChIP prostate gland ENCFF881OMH 179 bp overlap
ChIP stomach ENCFF820WZN 171 bp overlap
ChIP vagina ENCFF305NWS 113 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 325 bp overlap
PRDM1 4 datasets
ChIP A549 ENCFF012KDW 89 bp overlap
ChIP HEK293 ENCFF302TBP 70 bp overlap
ChIP HeLa-S3 ENCFF893HDJ 97 bp overlap
ChIP HeLa-S3 ENCSR000ECY.PRDM1.HeLa-S3 66 bp overlap
RELA 6 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 74 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 109 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 116 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 94 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 67 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 80 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 224 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 198 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 440 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 130 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 62 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 225 bp overlap
ChIP liver ENCFF769YSM 228 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 52 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 60 bp overlap
STAT3 3 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 61 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 83 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 70 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 210 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 347 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 71 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 87 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 157 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 100 bp overlap
TFCP2L1 1 dataset
ChIP A549 ENCFF393VBT 83 bp overlap
TRIM28 3 datasets
ChIP K-562 ENCSR474CVP.TRIM28.K-562 69 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 211 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 233 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 100 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 57 bp overlap
ZFHX3 1 dataset
ChIP HepG2 ENCFF082SJV 383 bp overlap
ZNF700 2 datasets
ChIP K-562 ENCSR959BQO.ZNF700.K-562 137 bp overlap
ChIP K562 ENCFF657OXY 220 bp overlap
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