chr1 : 120,851,186 120,851,421
235 bp 49 TFs 2 linked genes
This 235 bp open chromatin element is linked to RNVU1-19 and ENSG00000287979 and is bound by 49 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RNVU1-19 201 bp At TSS Proximity
ENSG00000287979 201 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:120,846,186 – 120,856,421
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
ATF1 2 datasets
ChIP HepG2 ENCFF239LTQ 235 bp overlap
ChIP K562 ENCFF817JQF 235 bp overlap
ATF2 3 datasets
ChIP HepG2 ENCFF578ZBI 105 bp overlap
ChIP HepG2 ENCFF578ZBI 235 bp overlap
ChIP K562 ENCFF139ZZG 235 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 235 bp overlap
CBX5 1 dataset
ChIP HepG2 ENCFF251YQZ 235 bp overlap
CDC5L 1 dataset
ChIP K562 ENCFF644OMA 57 bp overlap
CREB1 9 datasets
ChIP GM12878 ENCFF870CVH 194 bp overlap
ChIP GM23338 ENCFF432ZEW 226 bp overlap
ChIP H1 ENCFF955PMP 235 bp overlap
ChIP HepG2 ENCFF245CBB 235 bp overlap
ChIP HepG2 ENCFF576ERP 235 bp overlap
ChIP HepG2 ENCFF792THT 235 bp overlap
ChIP Ishikawa ENCFF197ISF 235 bp overlap
ChIP MCF-7 ENCFF341ZEM 197 bp overlap
ChIP MCF-7 ENCFF867SAS 203 bp overlap
CREM 2 datasets
ChIP GM12878 ENCFF391UGE 235 bp overlap
ChIP K562 ENCFF180STA 235 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF191BFW 235 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 209 bp overlap
EHMT2 1 dataset
ChIP K562 ENCFF053BWO 235 bp overlap
ELF1 3 datasets
ChIP GM12878 ENCFF432UGA 108 bp overlap
ChIP GM12878 ENCFF692SMY 188 bp overlap
ChIP K562 ENCFF496AKI 127 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 111 bp overlap
GABPA 12 datasets
ChIP GM12878 ENCFF872TWR 139 bp overlap
ChIP HL-60 ENCFF515BEZ 123 bp overlap
ChIP HL-60 ENCFF515BEZ 235 bp overlap
ChIP Hep-G2 ENCSR000BJK.GABPA.Hep-G2 156 bp overlap
ChIP HepG2 ENCFF180FFY 223 bp overlap
ChIP HepG2 ENCFF467OEO 235 bp overlap
ChIP K562 ENCFF139LXS 235 bp overlap
ChIP K562 ENCFF996TSW 137 bp overlap
ChIP MCF-7 ENCFF735CHO 229 bp overlap
ChIP SK-N-SH ENCFF755TJJ 218 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 133 bp overlap
ChIP liver ENCFF500III 235 bp overlap
GABPB1 2 datasets
ChIP HepG2 ENCFF315AWN 235 bp overlap
ChIP K562 ENCFF015GDS 235 bp overlap
GTF2A2 1 dataset
ChIP K562 ENCFF041WRN 58 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 58 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF940JZP 235 bp overlap
HMGXB4 1 dataset
ChIP HepG2 ENCFF179TAD 51 bp overlap
HOXA3 1 dataset
ChIP HepG2 ENCFF374TCI 191 bp overlap
JUND 1 dataset
ChIP K562 ENCFF830LVJ 232 bp overlap
MED1 1 dataset
ChIP HepG2 ENCFF495TSS 111 bp overlap
MNT 1 dataset
ChIP K562 ENCFF342DNS 115 bp overlap
NFATC3 2 datasets
ChIP GM12878 ENCFF340KVJ 119 bp overlap
ChIP K562 ENCFF078EKB 95 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF057YFW 235 bp overlap
NRF1 5 datasets
ChIP K562 ENCFF130SGK 235 bp overlap
ChIP K562 ENCFF689EWI 235 bp overlap
ChIP K562 ENCFF689EWI 170 bp overlap
ChIP K562 ENCFF791UHF 235 bp overlap
ChIP K562 ENCFF791UHF 187 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 213 bp overlap
POLR2A 10 datasets
ChIP H54 ENCFF398BXN 197 bp overlap
ChIP K562 ENCFF215CWW 235 bp overlap
ChIP K562 ENCFF836GHX 87 bp overlap
ChIP MCF-7 ENCFF309IKZ 235 bp overlap
ChIP body of pancreas ENCFF675RCN 60 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 205 bp overlap
ChIP neural cell ENCFF604SPB 144 bp overlap
ChIP spleen ENCFF446ZGT 235 bp overlap
ChIP spleen ENCFF706IUS 232 bp overlap
ChIP thyroid gland ENCFF979LRR 235 bp overlap
POLR2G 1 dataset
ChIP K562 ENCFF047BLG 235 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 53 bp overlap
POU2F1 3 datasets
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 97 bp overlap
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 102 bp overlap
ChIP HepG2 ENCFF422JZU 201 bp overlap
RBFOX2 4 datasets
ChIP HepG2 ENCFF554DMZ 235 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 143 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 143 bp overlap
ChIP K562 ENCFF967GRF 235 bp overlap
SNAPC5 1 dataset
ChIP HepG2 ENCFF853IKB 164 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 235 bp overlap
SREBF1 2 datasets
ChIP Hep-G2 ENCSR000EEO.SREBF1.Hep-G2 51 bp overlap
ChIP MCF-7 ENCFF254QOR 164 bp overlap
SUZ12 1 dataset
ChIP MCF-7 ENCFF739TYI 112 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 235 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 235 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 235 bp overlap
YY1 4 datasets
ChIP HCT116 ENCFF497ZQZ 177 bp overlap
ChIP Ishikawa ENCFF505XQX 217 bp overlap
ChIP K562 ENCFF660QRE 234 bp overlap
ChIP SK-N-SH ENCFF087JSD 235 bp overlap
ZBTB11 2 datasets
ChIP K562 ENCFF215OUF 106 bp overlap
ChIP K562 ENCFF215OUF 235 bp overlap
ZBTB21 1 dataset
ChIP HepG2 ENCFF276JLT 224 bp overlap
ZBTB40 3 datasets
ChIP GM12878 ENCFF346DYM 235 bp overlap
ChIP K562 ENCFF521DSV 235 bp overlap
ChIP MCF-7 ENCFF044DWL 235 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 64 bp overlap
ZHX2 1 dataset
ChIP HepG2 ENCFF878CNQ 235 bp overlap
ZKSCAN8 1 dataset
ChIP K562 ENCFF387ETI 60 bp overlap
ZNF143 4 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 57 bp overlap
ChIP HepG2 ENCFF658YIR 208 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 154 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 152 bp overlap
ZNF184 1 dataset
ChIP K562 ENCFF717TPQ 103 bp overlap
ZNF589 1 dataset
ChIP K562 ENCFF770FHN 63 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 85 bp overlap