chr5 : 171,415,116 171,415,627
511 bp 60 TFs 1 linked gene
This 511 bp open chromatin element is linked to FGF18 and is bound by 60 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FGF18 4.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:171,410,116 – 171,420,627
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 77 bp overlap
ARID2 2 datasets
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 485 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 264 bp overlap
BCL11A 2 datasets
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 59 bp overlap
ChIP HEK293 ENCFF294OHB 282 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 357 bp overlap
CDK8 1 dataset
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 55 bp overlap
CTCF 1 dataset
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 84 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 80 bp overlap
DPF2 1 dataset
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 224 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 144 bp overlap
HOXB13 4 datasets
ChIP G-401 GSE65381.HOXB13.G-401 455 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 217 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 59 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 155 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 366 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 333 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 329 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 275 bp overlap
JUN 3 datasets
ChIP A549 ENCFF191QZG 504 bp overlap
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 132 bp overlap
ChIP myometrium_PT916 GSE128230.JUN.myometrium_PT916 53 bp overlap
JUND 1 dataset
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 183 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 270 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 172 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 143 bp overlap
MEN1 1 dataset
ChIP HCT-116_B1 GSE152144.MEN1.HCT-116_B1 359 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 170 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 348 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 378 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 356 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 329 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 323 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 282 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 198 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 136 bp overlap
NFIB 1 dataset
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 244 bp overlap
NFIC 5 datasets
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 220 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 303 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 393 bp overlap
ChIP K562 ENCFF167YID 223 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 212 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 236 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 204 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 442 bp overlap
POLR2A 17 datasets
ChIP GM12891 ENCFF012SUT 355 bp overlap
ChIP H1 ENCFF566JSR 368 bp overlap
ChIP HCT116 ENCFF508RDJ 295 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 310 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 293 bp overlap
ChIP HeLa-S3 ENCFF773DNG 350 bp overlap
ChIP HepG2 ENCFF252NAR 298 bp overlap
ChIP HepG2 ENCFF422YUC 477 bp overlap
ChIP HepG2 ENCFF736SLT 457 bp overlap
ChIP HepG2 ENCFF736SLT 261 bp overlap
ChIP K562 ENCFF215CWW 259 bp overlap
ChIP SK-N-MC ENCFF088IVG 68 bp overlap
ChIP SK-N-MC ENCFF088IVG 133 bp overlap
ChIP SK-N-SH ENCFF683PFH 121 bp overlap
ChIP endothelial cell of umbilical vein ENCFF467WJF 276 bp overlap
ChIP stomach ENCFF820WZN 345 bp overlap
ChIP stomach ENCFF820WZN 201 bp overlap
POLR2G 3 datasets
ChIP HepG2 ENCFF241AEG 345 bp overlap
ChIP HepG2 ENCFF508UTS 205 bp overlap
ChIP K562 ENCFF648YPL 467 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 149 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 230 bp overlap
ChIP HepG2 ENCFF561IAJ 221 bp overlap
RPA2_phospho 3 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 329 bp overlap
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 335 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 332 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 119 bp overlap
SMAD3 2 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 87 bp overlap
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 380 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 308 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 343 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 227 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 214 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 215 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 221 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 252 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 284 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 347 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 121 bp overlap
SUPT5H 11 datasets
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 352 bp overlap
ChIP DLD-1_NELFE-AID GSE144786.SUPT5H.DLD-1_NELFE-AID 278 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 394 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 358 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 268 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 289 bp overlap
ChIP U2OS_DMSO GSE115365.SUPT5H.U2OS_DMSO 325 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 349 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 228 bp overlap
ChIP U2OS_siMYC_High GSE115365.SUPT5H.U2OS_siMYC_High 255 bp overlap
ChIP U2OS_siMYC_ON GSE115365.SUPT5H.U2OS_siMYC_ON 147 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 444 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCFF467DDW 108 bp overlap
TFCP2L1 1 dataset
ChIP A549 ENCFF393VBT 228 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 179 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 381 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 255 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 451 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCFF942LFP 157 bp overlap
ZNF121 2 datasets
ChIP HEK293 ENCFF839FUF 85 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 163 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCFF066NGR 169 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 309 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 230 bp overlap
ZNF362 3 datasets
ChIP HEK293 ENCFF436CGE 101 bp overlap
ChIP HEK293 ENCFF436CGE 449 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 511 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 160 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 493 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 445 bp overlap
ZNF770 1 dataset
ChIP HEK293 ENCFF468FCG 208 bp overlap