chr5 : 113,246,349 – 113,247,058
709 bp 54 TFs 0 linked genes
This 709 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:113,241,349 – 113,252,058
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_P29_T GSE130408.AR.prostate_P29_T 173 bp overlap
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 421 bp overlap
BRD4 12 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 184 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 219 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 193 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 319 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 220 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 215 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 163 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 262 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 197 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 262 bp overlap
ChIP SEM GSE83671.BRD4.SEM 285 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 229 bp overlap
CDK8 5 datasets
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 164 bp overlap
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 125 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 64 bp overlap
ChIP myometrium_PT967 GSE128230.CDK8.myometrium_PT967 197 bp overlap
ChIP myometrium_PT967 GSE128230.CDK8.myometrium_PT967 74 bp overlap
CDK9 1 dataset
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 331 bp overlap
CEBPA 5 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 136 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 136 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 124 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 94 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 102 bp overlap
CEBPB 8 datasets
ChIP HL-60 GSE107553.CEBPB.HL-60 192 bp overlap
ChIP HL-60_CEBPB_overexpressed GSE100486.CEBPB.HL-60_CEBPB_overexpressed 113 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 219 bp overlap
ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 231 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 237 bp overlap
ChIP monocyte GSE98367.CEBPB.monocyte 158 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 273 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 265 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 236 bp overlap
ChIP macrophage GSE136216.CHD4.macrophage 237 bp overlap
CREBBP 1 dataset
ChIP monocyte_IFNg-LPS GSE131294.CREBBP.monocyte_IFNg-LPS 163 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 122 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 272 bp overlap
CTCF 1 dataset
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 189 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 300 bp overlap
ChIP BLaER1 ENCFF460KDD 251 bp overlap
ChIP BLaER1 ENCFF896HSY 233 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 277 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 264 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 172 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
FOSL2 1 dataset
ChIP hESC GSE69539.FOSL2.hESC 407 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 583 bp overlap
ChIP DE DE-FOXA2-2 563 bp overlap
GABPA 6 datasets
ChIP HL-60 ENCSR000BTK.GABPA.HL-60 140 bp overlap
ChIP K562 ENCFF139LXS 486 bp overlap
ChIP liver ENCFF027VSJ 242 bp overlap
ChIP liver ENCFF500III 278 bp overlap
ChIP liver ENCSR038GMB.GABPA.liver 172 bp overlap
ChIP liver ENCSR350ORK.GABPA.liver 121 bp overlap
GATA2 6 datasets
ChIP ESF GSE108408.GATA2.ESF 481 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 295 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 324 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 302 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 307 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 526 bp overlap
ChIP DE DE-GATA4-2 602 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 465 bp overlap
ChIP DE DE-GATA6-2 709 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 59 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 365 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 559 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 370 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 426 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 201 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 149 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 312 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 196 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 124 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 176 bp overlap
MED12 6 datasets
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 65 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 158 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 110 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 98 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 177 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 172 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 180 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 191 bp overlap
NR2F2 3 datasets
ChIP liver ENCSR168SMX.NR2F2.liver 257 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 224 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 366 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 148 bp overlap
PGR 3 datasets
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 172 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 462 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 311 bp overlap
POLR2A 7 datasets
ChIP PFSK-1 ENCFF576NIT 385 bp overlap
ChIP breast epithelium ENCFF045XXN 347 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 370 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 370 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 341 bp overlap
ChIP sigmoid colon ENCFF748YVT 445 bp overlap
ChIP sigmoid colon ENCFF754JQR 299 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 160 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 200 bp overlap
REST 2 datasets
ChIP liver ENCSR893QWP.REST.liver 191 bp overlap
ChIP liver ENCSR867WPH.REST.liver 217 bp overlap
RUNX1 3 datasets
ChIP MV4-11 GSE79899.RUNX1.MV4-11 235 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 230 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 186 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 521 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 345 bp overlap
SMARCA4 4 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 229 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 157 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 312 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 231 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 311 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 426 bp overlap
SPI1 27 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 190 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 231 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 160 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 166 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 221 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 167 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 185 bp overlap
ChIP HL-60 ENCFF645GBT 103 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 213 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 139 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 184 bp overlap
ChIP K562 ENCFF410ORC 155 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 235 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 193 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 257 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 117 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 189 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 155 bp overlap
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 161 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 221 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 193 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 164 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 152 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 232 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 159 bp overlap
ChIP primary-monocyte_LPS-4h_donorO GSE128834.SPI1.primary-monocyte_LPS-4h_donorO 137 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 134 bp overlap
SPIB 1 dataset
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 173 bp overlap
SS18 1 dataset
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 271 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 133 bp overlap
STAT1 3 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 217 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 228 bp overlap
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 117 bp overlap
STAT3 3 datasets
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 188 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 141 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 203 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 219 bp overlap
TP53 1 dataset
ChIP MOLM-13_R282W_DMSO GSE131484.TP53.MOLM-13_R282W_DMSO 137 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 197 bp overlap
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