chr5 : 86,716,011 – 86,716,456

445 bp 80 TFs 0 linked genes

This 445 bp open chromatin element has no linked target genes and is bound by 80 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

80 transcription factors

Arid3a 1 dataset

Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap

BCL11A 1 dataset

ChIP WA01 ENCSR000BIP.BCL11A.WA01 107 bp overlap

CTCF 1 dataset

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

DUX4 1 dataset

Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap

EHF 1 dataset

Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap

ELF3 1 dataset

Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 215 bp overlap

EP300 2 datasets

ChIP Ishikawa ENCFF364ZWT 332 bp overlap

ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 290 bp overlap

ESR1 16 datasets

ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 300 bp overlap

ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 236 bp overlap

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 183 bp overlap

ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 275 bp overlap

ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 242 bp overlap

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 305 bp overlap

ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 232 bp overlap

ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 93 bp overlap

ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 408 bp overlap

ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 445 bp overlap

ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 258 bp overlap

ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 309 bp overlap

ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 382 bp overlap

ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 334 bp overlap

ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 301 bp overlap

ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 250 bp overlap

ETV2 1 dataset

Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap

ETV7 1 dataset

Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 105 bp overlap

Erg 1 dataset

Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 279 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 130 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-2 239 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 130 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 283 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 445 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 256 bp overlap

GLIS1 2 datasets

ChIP HEK293 ENCFF299RSE 370 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 251 bp overlap

Isl1 1 dataset

Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 174 bp overlap

KDM5B 1 dataset

ChIP WA01 ENCSR000AUR.KDM5B.WA01 125 bp overlap

KLF1 1 dataset

ChIP HEK293 ENCSR859BMR.KLF1.HEK293 210 bp overlap

KLF15 1 dataset

ChIP HEK293 GSE76494.KLF15.HEK293 140 bp overlap

KLF17 2 datasets

ChIP HEK293 ENCFF658MHR 385 bp overlap

ChIP HEK293 ENCSR065WUF.KLF17.HEK293 291 bp overlap

MAX 3 datasets

ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 240 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 263 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 212 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 188 bp overlap

MXI1 1 dataset

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

MYC 2 datasets

ChIP LNCaP GSE117430.MYC.LNCaP 176 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 201 bp overlap

NANOG 7 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 327 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 278 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 161 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 391 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 284 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 281 bp overlap

ChIP hESC GSE20650.NANOG.hESC 176 bp overlap

NCOR2 1 dataset

ChIP LS180 GSE39277.NCOR2.LS180 100 bp overlap

NFIC 2 datasets

ChIP Ishikawa ENCFF029AAD 345 bp overlap

ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 289 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 228 bp overlap

NKX6-3 1 dataset

Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap

NR3C1 2 datasets

ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 193 bp overlap

ChIP Ishikawa_Dex GSE109891.NR3C1.Ishikawa_Dex 164 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Prdm15 1 dataset

Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SCRT1 1 dataset

Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SIX2 3 datasets

Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 287 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 152 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 320 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 420 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 438 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 334 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 403 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 301 bp overlap

SNAI2 2 datasets

Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap

ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 244 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap

SREBF2 1 dataset

Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap

Six3 1 dataset

Motif DE_12h DE_12h-Six3_MA0631.2 11 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 192 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 176 bp overlap

TCF12 2 datasets

ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 302 bp overlap

ChIP WA01 ENCSR000BIT.TCF12.WA01 132 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TEAD3 1 dataset

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

TEAD4 4 datasets

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 234 bp overlap

ChIP Ishikawa ENCFF772OTG 300 bp overlap

ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 225 bp overlap

WT1 2 datasets

ChIP HEK293 ENCFF906HIR 109 bp overlap

ChIP HEK293 ENCSR966PJJ.WT1.HEK293 355 bp overlap

YY1 2 datasets

ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 127 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 144 bp overlap

YY1AP1 1 dataset

ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 269 bp overlap

ZBTB48 1 dataset

ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 242 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZIC1 1 dataset

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 230 bp overlap

ZIC4 1 dataset

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap

ZNF263 1 dataset

ChIP HEK293 ENCFF336CWQ 328 bp overlap

ZNF280D 1 dataset

ChIP HEK293 ENCSR451CYX.ZNF280D.HEK293 255 bp overlap

ZNF366 1 dataset

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 288 bp overlap

ZNF398 1 dataset

ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 313 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 262 bp overlap

ZNF440 1 dataset

ChIP HEK293T GSE78099.ZNF440.HEK293T 153 bp overlap

ZNF462 1 dataset

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 248 bp overlap

ZNF577 1 dataset

ChIP HEK293 ENCSR776MDR.ZNF577.HEK293 302 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

ZSCAN21 1 dataset

Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap