chr5 : 82,639,830 82,640,229
399 bp 59 TFs 0 linked genes
This 399 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:82,634,830 – 82,645,229
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 399 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 212 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 69 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 215 bp overlap
CDK7 1 dataset
ChIP Jurkat_DMSO GSE60027.CDK7.Jurkat_DMSO 179 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 399 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 399 bp overlap
CEBPB 2 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 252 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 65 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 287 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 99 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 237 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 399 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 399 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 349 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 370 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 235 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 174 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 337 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 300 bp overlap
FOXA1 3 datasets
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 325 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 385 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 98 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 397 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 253 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 351 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 306 bp overlap
GATA3 9 datasets
ChIP BE2C GSE65664.GATA3.BE2C 160 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 393 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 398 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 341 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 238 bp overlap
ChIP SH-SY5Y ENCFF475HYF 396 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 326 bp overlap
ChIP SK-N-SH ENCFF040SSB 161 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 165 bp overlap
GFI1 1 dataset
ChIP THP-1 GSE90769.GFI1.THP-1 50 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 399 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 218 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 276 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 209 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 268 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 261 bp overlap
MED1 8 datasets
ChIP SGBS GSE64233.MED1.SGBS 262 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 252 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 168 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 188 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 168 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 222 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 237 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 379 bp overlap
MYB 5 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 399 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 361 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 309 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 325 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 246 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 399 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 63 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 174 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 399 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 60 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 207 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 287 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 366 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 107 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 131 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 190 bp overlap
RAD21 2 datasets
ChIP liver ENCFF522JHE 231 bp overlap
ChIP liver ENCFF522JHE 262 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 381 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 203 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 2 datasets
ChIP NALM-6 GSE126300.RUNX1.NALM-6 208 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 190 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 316 bp overlap
SMARCC1 2 datasets
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 98 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 220 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 107 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 295 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 160 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 316 bp overlap
ChIP HCT116 ENCFF038POZ 162 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 282 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Thap11 1 dataset
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
YY1 1 dataset
ChIP ALL GSE145549.YY1.ALL 329 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 89 bp overlap
ChIP HEK293 ENCFF865LIO 289 bp overlap
ZNF211 1 dataset
Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap