chr5 : 77,958,827 77,959,215
388 bp 60 TFs 1 linked gene
This 388 bp open chromatin element is linked to ENSG00000287162 and is bound by 60 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000287162 630 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:77,953,827 – 77,964,215
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 233 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 215 bp overlap
BMI1 1 dataset
ChIP K-562 ENCSR782WRO.BMI1.K-562 288 bp overlap
CBX2 1 dataset
ChIP K562 ENCFF578AQI 388 bp overlap
CBX8 2 datasets
ChIP K-562_HS GSE121182.CBX8.K-562_HS 388 bp overlap
ChIP K562 ENCFF485TBL 388 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 171 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 145 bp overlap
ChIP H1 ENCFF126NLU 145 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 151 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP K562 ENCFF139VAJ 193 bp overlap
CTCF 1 dataset
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 288 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 149 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 242 bp overlap
EZH2 8 datasets
ChIP A673 ENCFF955JRZ 112 bp overlap
ChIP A673 ENCFF955JRZ 359 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 188 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 50 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 99 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 107 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 177 bp overlap
ChIP keratinocyte ENCFF070STK 346 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 388 bp overlap
ChIP DE DE-FOXA2-2 388 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 241 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 166 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 278 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 285 bp overlap
ChIP DE DE-GATA4-1 388 bp overlap
ChIP DE DE-GATA4-2 380 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 315 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 383 bp overlap
ChIP DE DE-GATA6-2 388 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 388 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 388 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 388 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 388 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 148 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 62 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 209 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 52 bp overlap
JUN 5 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 278 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 105 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 110 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 167 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 218 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 127 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 133 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 388 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 180 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 135 bp overlap
ChIP H1 ENCFF747ZPQ 158 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 248 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 182 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 321 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 300 bp overlap
ChIP hESC GSE18292.NANOG.hESC 65 bp overlap
ChIP hESC GSE20650.NANOG.hESC 177 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 332 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 328 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 152 bp overlap
POU5F1 15 datasets
ChIP BG03 GSE21614.POU5F1.BG03 164 bp overlap
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 177 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 199 bp overlap
ChIP GM23338 ENCFF333SNB 145 bp overlap
ChIP H1 ENCFF698ZAP 141 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 280 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 99 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 122 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 185 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 166 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 67 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 206 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 273 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 173 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 155 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 129 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 111 bp overlap
PRDM14 3 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 214 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 122 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 205 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 115 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 388 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 277 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 240 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 201 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 238 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 288 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 190 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 127 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 115 bp overlap
RNF2 10 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 349 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 217 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 388 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 113 bp overlap
ChIP K562 ENCFF022XJR 257 bp overlap
ChIP K562 ENCFF061ATI 267 bp overlap
ChIP K562 ENCFF295YTA 292 bp overlap
ChIP K562 ENCFF653BQJ 388 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 303 bp overlap
ChIP hMSC_D10 GSE125166.RNF2.hMSC_D10 312 bp overlap
RYBP 2 datasets
ChIP WA01 GSE104690.RYBP.WA01 252 bp overlap
ChIP WA01 GSE104690.RYBP.WA01 57 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 173 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 325 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 154 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 140 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 314 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 388 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 388 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 370 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 201 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 157 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 155 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 388 bp overlap
ChIP K562 ENCFF316MCJ 388 bp overlap
ChIP K562 ENCFF316MCJ 204 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 152 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 236 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 240 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 284 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 345 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 296 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 388 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 388 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 388 bp overlap
SOX2 7 datasets
ChIP H9 GSE46837.SOX2.H9 164 bp overlap
ChIP NPC GSE122631.SOX2.NPC 192 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 168 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 174 bp overlap
ChIP hESC GSE18292.SOX2.hESC 70 bp overlap
ChIP hESC GSE69479.SOX2.hESC 160 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 231 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 179 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 282 bp overlap
SUZ12 2 datasets
ChIP hiPSC GSE124903.SUZ12.hiPSC 216 bp overlap
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 226 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 195 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 186 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 165 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 283 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 364 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 388 bp overlap
ChIP K562 ENCFF255RZG 228 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 247 bp overlap
ZNF543 1 dataset
ChIP HEK293T GSE78099.ZNF543.HEK293T 186 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 325 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 258 bp overlap