chr4 : 142,921,637 – 142,922,546
909 bp 106 TFs 0 linked genes
This 909 bp open chromatin element has no linked target genes and is bound by 106 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:142,916,637 – 142,927,546
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_48h DE_48h-ASCL1_MA1631.2 9 bp overlap
Arid3a 2 datasets
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
BARX2 2 datasets
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
BHLHE22 1 dataset
Motif DE_48h DE_48h-BHLHE22_MA1635.2 6 bp overlap
BRD4 1 dataset
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
CEBPG 2 datasets
Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap
Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap
DUX4 2 datasets
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Dux 2 datasets
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
ELK1::HOXA1 2 datasets
Motif DE_48h DE_48h-ELK1HOXA1_MA1931.1 14 bp overlap
Motif DE_72h DE_72h-ELK1HOXA1_MA1931.1 14 bp overlap
ELK1::HOXB13 2 datasets
Motif DE_48h DE_48h-ELK1HOXB13_MA1932.2 15 bp overlap
Motif DE_72h DE_72h-ELK1HOXB13_MA1932.2 15 bp overlap
EOMES 2 datasets
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ERF::FOXI1 2 datasets
Motif DE_48h DE_48h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 2 datasets
Motif DE_48h DE_48h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_60h DE_60h-ERFFOXO1_MA1936.2 12 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_48h DE_48h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::DRGX 2 datasets
Motif DE_48h DE_48h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_72h DE_72h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::FOXI1 2 datasets
Motif DE_48h DE_48h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_60h DE_60h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_48h DE_48h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_48h DE_48h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 483 bp overlap
ChIP DE DE-FOXA2-2 535 bp overlap
FOXJ2::ELF1 2 datasets
Motif DE_48h DE_48h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_60h DE_60h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXN3 1 dataset
Motif DE_48h DE_48h-FOXN3_MA1489.1 8 bp overlap
FOXO1::ELF1 2 datasets
Motif DE_48h DE_48h-FOXO1ELF1_MA1953.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_48h DE_48h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_48h DE_48h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_48h DE_48h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_60h DE_60h-FOXO1FLI1_MA1956.2 13 bp overlap
Foxl2 1 dataset
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 596 bp overlap
ChIP DE DE-GATA4-2 671 bp overlap
ChIP foregut GSE117136.GATA4.foregut 262 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 545 bp overlap
ChIP DE DE-GATA6-2 764 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 517 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 393 bp overlap
GCM1 1 dataset
Motif DE_48h DE_48h-GCM1_MA0646.2 10 bp overlap
HNF1A 2 datasets
Motif DE_48h DE_48h-HNF1A_MA0046.3 13 bp overlap
Motif DE_72h DE_72h-HNF1A_MA0046.3 13 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_48h DE_48h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif DE_72h DE_72h-HOXB2ELK1_MA1957.1 14 bp overlap
HOXD12::ELK1 2 datasets
Motif DE_48h DE_48h-HOXD12ELK1_MA1958.2 13 bp overlap
Motif DE_72h DE_72h-HOXD12ELK1_MA1958.2 13 bp overlap
Hand1 2 datasets
Motif DE_48h DE_48h-Hand1_MA2123.1 9 bp overlap
Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap
Hmx2 3 datasets
Motif DE_48h DE_48h-Hmx2_MA0897.2 15 bp overlap
Motif DE_48h DE_48h-Hmx2_MA0897.2 15 bp overlap
Motif DE_72h DE_72h-Hmx2_MA0897.2 15 bp overlap
ISL2 1 dataset
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
Irf1 2 datasets
Motif DE_48h DE_48h-Irf1_MA0050.4 11 bp overlap
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
JUN 2 datasets
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
JUND 2 datasets
Motif DE_48h DE_48h-JUND_MA0492.2 11 bp overlap
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
MAFF 1 dataset
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
MGA 2 datasets
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
MSC 2 datasets
Motif DE_48h DE_48h-MSC_MA0665.1 10 bp overlap
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MXI1 1 dataset
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
MYOD1 1 dataset
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
NFIC::TLX1 2 datasets
Motif DE_48h DE_48h-NFICTLX1_MA0119.1 14 bp overlap
Motif DE_72h DE_72h-NFICTLX1_MA0119.1 14 bp overlap
NKX2-3 1 dataset
Motif DE_48h DE_48h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_48h DE_48h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_48h DE_48h-NKX2-8_MA0673.2 8 bp overlap
NR1D1 2 datasets
Motif DE_48h DE_48h-NR1D1_MA1531.2 14 bp overlap
Motif DE_60h DE_60h-NR1D1_MA1531.2 14 bp overlap
NRL 1 dataset
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
Neurod2 1 dataset
Motif DE_48h DE_48h-Neurod2_MA1993.2 6 bp overlap
Nfe2l2 2 datasets
Motif DE_48h DE_48h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_60h DE_60h-Nfe2l2_MA0150.3 11 bp overlap
Nkx3-1 1 dataset
Motif DE_48h DE_48h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_48h DE_48h-Nkx3-2_MA0122.4 10 bp overlap
Nr2F6 2 datasets
Motif DE_48h DE_48h-Nr2F6_MA0728.1 15 bp overlap
Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap
Nr2e1 2 datasets
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
Olig2 1 dataset
Motif DE_48h DE_48h-Olig2_MA1997.2 6 bp overlap
PAX3 2 datasets
Motif DE_48h DE_48h-PAX3_MA0780.1 10 bp overlap
Motif DE_72h DE_72h-PAX3_MA0780.1 10 bp overlap
PHOX2B 2 datasets
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
POU4F1 2 datasets
Motif DE_48h DE_48h-POU4F1_MA0790.2 12 bp overlap
Motif DE_72h DE_72h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_48h DE_48h-POU4F2_MA0683.2 15 bp overlap
Motif DE_72h DE_72h-POU4F2_MA0683.2 15 bp overlap
POU4F3 2 datasets
Motif DE_48h DE_48h-POU4F3_MA0791.2 12 bp overlap
Motif DE_72h DE_72h-POU4F3_MA0791.2 12 bp overlap
PPARA::RXRA 2 datasets
Motif DE_48h DE_48h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_72h DE_72h-PPARARXRA_MA1148.2 17 bp overlap
Pax7 2 datasets
Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap
Motif DE_72h DE_72h-Pax7_MA0680.3 10 bp overlap
Pparg::Rxra 2 datasets
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
Prdm5 1 dataset
Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap
RBPJ 2 datasets
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RORA 2 datasets
Motif DE_48h DE_48h-RORA_MA0072.2 11 bp overlap
Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap
SMAD2 4 datasets
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 553 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 319 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 260 bp overlap
SOX10 1 dataset
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
SOX14 1 dataset
Motif DE_48h DE_48h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 442 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 765 bp overlap
SOX4 2 datasets
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
Motif DE_48h DE_48h-SOX4_MA0867.3 8 bp overlap
SOX8 1 dataset
Motif DE_48h DE_48h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap
SPIB 2 datasets
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
SRY 1 dataset
Motif DE_48h DE_48h-SRY_MA0084.2 7 bp overlap
Sox11 1 dataset
Motif DE_48h DE_48h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_48h DE_48h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_48h DE_48h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_48h DE_48h-Sox7_MA2095.1 10 bp overlap
TBR1 2 datasets
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap
TBX1 2 datasets
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX18 2 datasets
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
Motif DE_60h DE_60h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap
TBX21 2 datasets
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap
TBX4 2 datasets
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap
TBX5 2 datasets
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
Tbx6 2 datasets
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
Tcf12 1 dataset
Motif DE_48h DE_48h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_48h DE_48h-Twist2_MA0633.3 6 bp overlap
VENTX 2 datasets
Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap
Motif DE_72h DE_72h-VENTX_MA0724.1 9 bp overlap
ZNF140 2 datasets
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
Motif DE_72h DE_72h-ZNF140_MA1589.2 19 bp overlap
ZNF24 2 datasets
Motif DE_48h DE_48h-ZNF24_MA1124.1 13 bp overlap
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ZNF274 2 datasets
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap
ZNF324 2 datasets
Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap
Motif DE_72h DE_72h-ZNF324_MA1977.2 14 bp overlap
ZNF418 2 datasets
Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZNF582 1 dataset
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
ZNF652 2 datasets
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
ZSCAN4 2 datasets
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_60h DE_60h-ZSCAN4_MA1155.1 15 bp overlap
Zfp809 2 datasets
Motif DE_48h DE_48h-Zfp809_MA2125.1 9 bp overlap
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
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