chr4 : 80,182,435 80,182,804
369 bp 50 TFs 2 linked genes
This 369 bp open chromatin element is linked to PRDM8 and PRDM8-AS1 and is bound by 50 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
PRDM8 1.5 kb Proximal Proximity
PRDM8-AS1 7.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:80,177,435 – 80,187,804
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 248 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 263 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 324 bp overlap
BRD3 2 datasets
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 206 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 264 bp overlap
BRD4 14 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 149 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 241 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 232 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 251 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 66 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 93 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 369 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 369 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 216 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 255 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 185 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 254 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 296 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 165 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 188 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 282 bp overlap
CTCF 5 datasets
ChIP HCT-116 GSE131606.CTCF.HCT-116 348 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 334 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 369 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 369 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 145 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 197 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 139 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 135 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 246 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 157 bp overlap
EZH2 7 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 369 bp overlap
ChIP GM23338 ENCFF613YON 173 bp overlap
ChIP H1 ENCFF232NZA 256 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 226 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 138 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 108 bp overlap
ChIP neural progenitor cell ENCFF018MKA 369 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 224 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 323 bp overlap
GATA6 7 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 369 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 369 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 369 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 369 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 369 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 369 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 263 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 231 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 214 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 346 bp overlap
JARID2 2 datasets
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 270 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 369 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 328 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 369 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 290 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 369 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 369 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 250 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 184 bp overlap
JUNB 2 datasets
ChIP CD4 GSE116695.JUNB.CD4 73 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 352 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 68 bp overlap
KMT2A 2 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 181 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 238 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 57 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 110 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 288 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCFF273VKX 87 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 344 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 268 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 236 bp overlap
RELA 3 datasets
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 112 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 218 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 369 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 369 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 369 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 369 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 322 bp overlap
SMC1 1 dataset
ChIP HCT-116 GSE131606.SMC1.HCT-116 213 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 159 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 107 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 81 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF881NFR 369 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 301 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 298 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 132 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 203 bp overlap
TAL1 1 dataset
ChIP CCRF-CEM GSE33850.TAL1.CCRF-CEM 201 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 212 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 369 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 114 bp overlap
TFAP4 1 dataset
ChIP LNCaP GSE28857.TFAP4.LNCaP 158 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 215 bp overlap