chr3 : 122,013,334 – 122,014,100
766 bp 59 TFs 1 linked gene
This 766 bp open chromatin element is linked to ILDR1 and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ILDR1 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:122,008,334 – 122,019,100
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 17 datasets
ChIP LNCaP GSE80256.AR.LNCaP 452 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 202 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 65 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 67 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 100 bp overlap
ChIP VCaP-LTAD_DHT_10nM GSE94577.AR.VCaP-LTAD_DHT_10nM 50 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 57 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 695 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 111 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 766 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 497 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 132 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 52 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 270 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 54 bp overlap
ChIP prostate_1239_T GSE130408.AR.prostate_1239_T 186 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 254 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 430 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 171 bp overlap
CDX2 3 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 228 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 148 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 274 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 118 bp overlap
CTCF 59 datasets
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 133 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 213 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 204 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 175 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 175 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 156 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 259 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 150 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 116 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 99 bp overlap
ChIP GM12873 ENCFF711LOS 285 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 146 bp overlap
ChIP GM12878 ENCFF635MMB 217 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 118 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 248 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 162 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 235 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 153 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 218 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF210JUZ 362 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 213 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 125 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 382 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 242 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 264 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 307 bp overlap
ChIP VCaP ENCFF858YQT 282 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 403 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 187 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 159 bp overlap
ChIP body of pancreas ENCFF269EDN 374 bp overlap
ChIP body of pancreas ENCFF438KTE 441 bp overlap
ChIP body of pancreas ENCFF798MEO 297 bp overlap
ChIP body of pancreas ENCFF881RGF 281 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 175 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 279 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 335 bp overlap
ChIP endodermal cell ENCFF471YCZ 356 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 206 bp overlap
ChIP islet ERP004003.CTCF.islet 287 bp overlap
ChIP keratinocyte ENCFF805QIE 361 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 318 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 238 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 196 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 140 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 250 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 356 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 245 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 237 bp overlap
ChIP pancreas_body ENCSR307PFP.CTCF.pancreas_body 279 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 186 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 177 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 287 bp overlap
ChIP stomach ENCFF370OWL 417 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 356 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 196 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 453 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_LY500307 GSE108979.ESR2.MDA-MB-231_LY500307 141 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF118DKH 357 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 602 bp overlap
FOXA1 23 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 330 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 294 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 327 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 203 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.FOXA1.MCF-7_ARID1A-KO 245 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 176 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 323 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 234 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 239 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 183 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 547 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 564 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 225 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 152 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 112 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 201 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 566 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 401 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 75 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 365 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 231 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 147 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 147 bp overlap
FOXA2 11 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 229 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 219 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 557 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 382 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 204 bp overlap
ChIP DE DE-FOXA2-1 766 bp overlap
ChIP DE DE-FOXA2-2 766 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 303 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 266 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 225 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 757 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCFF264DJE 207 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 315 bp overlap
GATA3 1 dataset
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 113 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 419 bp overlap
ChIP DE DE-GATA4-1 749 bp overlap
ChIP DE DE-GATA4-2 708 bp overlap
ChIP foregut GSE117136.GATA4.foregut 556 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 753 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 766 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 238 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 208 bp overlap
ChIP DE DE-GATA6-1 754 bp overlap
ChIP DE DE-GATA6-2 766 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 488 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 137 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 253 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 294 bp overlap
ChIP foregut GSE117136.GATA6.foregut 574 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 647 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 343 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 672 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 211 bp overlap
HDGF 2 datasets
ChIP GM12878 ENCFF653WYI 481 bp overlap
ChIP MCF-7 ENCSR200CUA.HDGF.MCF-7 209 bp overlap
HNF4A 1 dataset
ChIP GP5D GSE51234.HNF4A.GP5D 296 bp overlap
HOXB13 2 datasets
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 364 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 225 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 657 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 577 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 643 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 284 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 416 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 136 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 283 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 242 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 164 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 241 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 234 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 421 bp overlap
PAX6 1 dataset
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 157 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 303 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 162 bp overlap
RAD21 5 datasets
ChIP GM12878 ENCFF046CBW 265 bp overlap
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 133 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 392 bp overlap
ChIP H1 ENCFF698EWO 237 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCFF916JXQ 60 bp overlap
RELB 1 dataset
ChIP GM12878 ENCFF217ADF 197 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 132 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 162 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 496 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 348 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 203 bp overlap
SMARCA5 1 dataset
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 212 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 251 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 395 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 197 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 132 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 337 bp overlap
STAT3 1 dataset
ChIP GM12878 ENCFF098ABL 139 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 154 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 455 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 361 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
TP63 14 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 637 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 122 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 124 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 279 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 214 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 522 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 239 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 139 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 310 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 181 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 221 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 306 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 218 bp overlap
ChIP keratinocyte_epidermal_KDPAF GSE67382.TP63.keratinocyte_epidermal_KDPAF 145 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 165 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 322 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 192 bp overlap
ZNF444 1 dataset
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 238 bp overlap
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