chr1 : 62,196,179 62,196,706
527 bp 51 TFs 1 linked gene
This 527 bp open chromatin element is linked to L1TD1 and is bound by 51 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
L1TD1 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:62,191,179 – 62,201,706
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
51 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 335 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 406 bp overlap
BCOR 3 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 192 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 322 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 368 bp overlap
BRD4 1 dataset
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 286 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 226 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 297 bp overlap
CHD1 6 datasets
ChIP H1 ENCFF128BID 221 bp overlap
ChIP H1 ENCFF128BID 391 bp overlap
ChIP H1 ENCFF128BID 172 bp overlap
ChIP H1 ENCFF998XEK 527 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 527 bp overlap
ChIP WA01 ENCSR000EBU.CHD1.WA01 399 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 55 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 180 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 214 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 109 bp overlap
ChIP BLaER1 ENCFF460KDD 170 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 241 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 144 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 245 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 173 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 74 bp overlap
EZH2 8 datasets
ChIP astrocyte ENCFF365JTP 471 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 329 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 527 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 207 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 340 bp overlap
ChIP neural progenitor cell ENCFF018MKA 527 bp overlap
ChIP neural progenitor cell ENCFF018MKA 241 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 287 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 270 bp overlap
ChIP DE DE-FOXA2-2 287 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 317 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 297 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 268 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 276 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 167 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 91 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 241 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 50 bp overlap
KDM5A 1 dataset
ChIP WA01 ENCSR160ZLP.KDM5A.WA01 376 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 399 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 447 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 281 bp overlap
NANOG 4 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 54 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 217 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 216 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 131 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 276 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 78 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 227 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 84 bp overlap
ChIP H1 ENCFF427UFV 381 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 256 bp overlap
ChIP H1 ENCFF770YBQ 216 bp overlap
ChIP H1 ENCFF833NJP 411 bp overlap
POU5F1 11 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 527 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 227 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 164 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 368 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 172 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 129 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 195 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 179 bp overlap
ChIP hiPSC GSE149017.POU5F1.hiPSC 126 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 94 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 74 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 171 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 164 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 151 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 356 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 373 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 430 bp overlap
ChIP H1 ENCFF042ZSL 412 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 116 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 139 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 268 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 118 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 166 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 136 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 159 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 183 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 161 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 136 bp overlap
TAF1 2 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 205 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 134 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 308 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 392 bp overlap
TBP 5 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 184 bp overlap
ChIP hESC GSE122298.TBP.hESC 182 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 324 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 409 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 286 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 349 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 253 bp overlap
YY1 2 datasets
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 128 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 149 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 236 bp overlap