chr3 : 5,464,032 – 5,464,358
326 bp 57 TFs 0 linked genes
This 326 bp open chromatin element has no linked target genes and is bound by 57 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:5,459,032 – 5,469,358
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
57 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 326 bp overlap
BCL11A 1 dataset
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 129 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 119 bp overlap
BRD3 2 datasets
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 326 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 326 bp overlap
BRD4 13 datasets
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 273 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 326 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 295 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 323 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 261 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 326 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 326 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 313 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 234 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 289 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 222 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 210 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 101 bp overlap
CDK8 4 datasets
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 326 bp overlap
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 326 bp overlap
ChIP monocyte_IFNg GSE120943.CDK8.monocyte_IFNg 178 bp overlap
ChIP monocyte_LPS GSE120943.CDK8.monocyte_LPS 154 bp overlap
CEBPA 2 datasets
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 121 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.CEBPA.SKH1_RUNX1-EVI1_KD 131 bp overlap
CEBPB 4 datasets
ChIP monocyte GSE98367.CEBPB.monocyte 175 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 264 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 279 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.CEBPB.monocyte_MACROPHAGE 153 bp overlap
CREBBP 4 datasets
ChIP monocyte_IFNg GSE131294.CREBBP.monocyte_IFNg 264 bp overlap
ChIP monocyte_IFNg-LPS GSE131294.CREBBP.monocyte_IFNg-LPS 268 bp overlap
ChIP monocyte_LPS GSE131294.CREBBP.monocyte_LPS 187 bp overlap
ChIP monocyte_Resting GSE131294.CREBBP.monocyte_Resting 176 bp overlap
EGR1 2 datasets
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 302 bp overlap
ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 254 bp overlap
EP300 2 datasets
ChIP NB4 GSE126720.EP300.NB4 162 bp overlap
ChIP tibial nerve ENCFF346AYA 326 bp overlap
ERG 4 datasets
ChIP ME-1 GSE46044.ERG.ME-1 326 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 232 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 213 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 293 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 326 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 287 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 196 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 326 bp overlap
FLI1 3 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 321 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 186 bp overlap
ChIP NB4 GSE23730.FLI1.NB4 190 bp overlap
FOSL1 1 dataset
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 213 bp overlap
GATA2 1 dataset
ChIP SKH1 GSE87283.GATA2.SKH1 190 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 278 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 261 bp overlap
ChIP K562 ENCFF348IBL 326 bp overlap
JMJD1C 1 dataset
ChIP NB4 GSE63484.JMJD1C.NB4 201 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 217 bp overlap
KMT2A 2 datasets
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 273 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 256 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 270 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 272 bp overlap
MAX 1 dataset
ChIP NB4 ENCFF966MWB 222 bp overlap
MED1 3 datasets
ChIP MOLM-14 GSE65138.MED1.MOLM-14 287 bp overlap
ChIP MOLM-14_DHE GSE124963.MED1.MOLM-14_DHE 224 bp overlap
ChIP RH4 GSE83726.MED1.RH4 128 bp overlap
MLLT1 1 dataset
ChIP MOLM-13 GSE82116.MLLT1.MOLM-13 95 bp overlap
MYC 1 dataset
ChIP NB4 ENCFF142PRP 213 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 280 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 248 bp overlap
ChIP hESC GSE18292.NANOG.hESC 184 bp overlap
NR4A1 2 datasets
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 326 bp overlap
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 317 bp overlap
POLR2A 1 dataset
ChIP HL-60 ENCFF321XKE 326 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 216 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 307 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 129 bp overlap
RAD21 4 datasets
ChIP MDM GSE103477.RAD21.MDM 145 bp overlap
ChIP MDM_-dNS1 GSE103477.RAD21.MDM_-dNS1 181 bp overlap
ChIP MDM_H5N1 GSE103477.RAD21.MDM_H5N1 174 bp overlap
ChIP MDM_IFNb GSE103477.RAD21.MDM_IFNb 275 bp overlap
RNF2 2 datasets
ChIP ME-1_Con GSE128771.RNF2.ME-1_Con 160 bp overlap
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 259 bp overlap
RUNX1 15 datasets
ChIP AML GSE111917.RUNX1.AML 243 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 118 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 118 bp overlap
ChIP HL-60 GSE107553.RUNX1.HL-60 184 bp overlap
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 312 bp overlap
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 285 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 244 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 232 bp overlap
ChIP ME-1_Human-leukemia_AI-10-49 GSE101789.RUNX1.ME-1_Human-leukemia_AI-10-49 293 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 244 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 326 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 240 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 206 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 210 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 256 bp overlap
RUNX1_mut 1 dataset
ChIP CD34 GSE111917.RUNX1_mut.CD34 220 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 326 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 326 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 326 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 326 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 201 bp overlap
SMAD1 1 dataset
ChIP CD34_PROG_BMP GSE29194.SMAD1.CD34_PROG_BMP 112 bp overlap
SMAD3-HIF1A 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 174 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 326 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 326 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 326 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 222 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 211 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 287 bp overlap
SMC1 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 231 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 307 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 66 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 326 bp overlap
SPI1 21 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 299 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 326 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 204 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 326 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 321 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 293 bp overlap
ChIP HL-60 ENCFF645GBT 139 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 174 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 263 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 317 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 323 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 255 bp overlap
ChIP dendrite GSE58864.SPI1.dendrite 254 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 323 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 322 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 306 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 326 bp overlap
ChIP primary-monocyte_4h_donorO GSE128834.SPI1.primary-monocyte_4h_donorO 300 bp overlap
ChIP primary-monocyte_LPS-4h_donorO GSE128834.SPI1.primary-monocyte_LPS-4h_donorO 321 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 169 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 220 bp overlap
STAT1 4 datasets
ChIP CD14 GSE43036.STAT1.CD14 184 bp overlap
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 319 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 316 bp overlap
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 299 bp overlap
STAT3 4 datasets
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 323 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 326 bp overlap
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 309 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 258 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 310 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 134 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 157 bp overlap
TRIM24 2 datasets
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 326 bp overlap
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 296 bp overlap
ZBTB16 2 datasets
ChIP KG-1 GSE109619.ZBTB16.KG-1 226 bp overlap
ChIP KG-1_shEZH2 GSE109619.ZBTB16.KG-1_shEZH2 200 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 229 bp overlap
ChIP K562 ENCFF875HLX 301 bp overlap
ZNF263 1 dataset
ChIP K562 ENCFF640RNA 326 bp overlap
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