Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 253 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 182 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 199 bp overlap

CASZ1 1 dataset

ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 203 bp overlap

CHD7 2 datasets

ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 154 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 273 bp overlap

CREB1 2 datasets

ChIP GM23338 ENCFF432ZEW 258 bp overlap

ChIP WA01 ENCSR000BSN.CREB1.WA01 141 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 308 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 156 bp overlap

E2F1 1 dataset

ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 190 bp overlap

E2F6 1 dataset

ChIP WA01 ENCSR000BSI.E2F6.WA01 118 bp overlap

EBF1 1 dataset

ChIP ASC GSE54889.EBF1.ASC 184 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 241 bp overlap

EP300 2 datasets

ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 139 bp overlap

ChIP hESC GSE17917.EP300.hESC 298 bp overlap

ETS1 1 dataset

ChIP hESC ENCSR534VHI.ETS1.hESC 121 bp overlap

FLI1 5 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 286 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 226 bp overlap

ChIP A-673_D11 GSE129155.FLI1.A-673_D11 298 bp overlap

ChIP A-673_D14 GSE129155.FLI1.A-673_D14 318 bp overlap

ChIP A-673_D17 GSE129155.FLI1.A-673_D17 235 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 364 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 143 bp overlap

GATA6 1 dataset

ChIP DE_D2 S55-DE-d2-GATA6-exp2 346 bp overlap

GLI3 1 dataset

Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 253 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 325 bp overlap

HDAC2 2 datasets

ChIP H1 ENCFF939VKA 237 bp overlap

ChIP WA01 ENCSR000BNR.HDAC2.WA01 166 bp overlap

JUN 5 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 297 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 377 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 387 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 269 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 501 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 138 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 431 bp overlap

ChIP hESC GSE18292.NANOG.hESC 128 bp overlap

NIPBL 3 datasets

ChIP hESC GSE64758.NIPBL.hESC 213 bp overlap

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 202 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 183 bp overlap

PHF19 1 dataset

ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 314 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 497 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 161 bp overlap

RELA 1 dataset

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 238 bp overlap

RNF2 1 dataset

ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 501 bp overlap

SMAD2 1 dataset

ChIP hESC GSE29422.SMAD2.hESC 116 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 301 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 460 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 358 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 329 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 359 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 501 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 293 bp overlap

SMAD3 3 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 165 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 163 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 224 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 319 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 449 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 459 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 430 bp overlap

SMARCC1 4 datasets

ChIP SYO-1 GSE108025.SMARCC1.SYO-1 352 bp overlap

ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 501 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 501 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 501 bp overlap

SOX13 1 dataset

Motif DE_12h DE_12h-SOX13_MA1120.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 209 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 314 bp overlap

SOX2 5 datasets

Motif DE_12h DE_12h-SOX2_MA0143.5 7 bp overlap

ChIP H9 GSE46837.SOX2.H9 158 bp overlap

ChIP HNSC GSE69479.SOX2.HNSC 162 bp overlap

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 196 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 232 bp overlap

SS18 1 dataset

ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 501 bp overlap

Sox17 1 dataset

Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap

Sox3 1 dataset

Motif DE_12h DE_12h-Sox3_MA0514.3 7 bp overlap

Sox5 1 dataset

Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap

Sox6 1 dataset

Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap

Sox7 1 dataset

Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 238 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 206 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 316 bp overlap

YY1 4 datasets

ChIP H1 ENCFF524BTL 307 bp overlap

ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 102 bp overlap

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 97 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 232 bp overlap

ZFP42 1 dataset

Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 312 bp overlap

ZNF114 1 dataset

ChIP GM23338 ENCFF631OSW 237 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 280 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 152 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 234 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 380 bp overlap

ZNF528 2 datasets

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

ChIP HEK293 GSE76494.ZNF528.HEK293 284 bp overlap

ZSCAN4 1 dataset

Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap

Genome Browser