chr2 : 144,324,542 144,324,957
415 bp 50 TFs 1 linked gene
This 415 bp open chromatin element is linked to GTDC1 and is bound by 50 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GTDC1 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:144,319,542 – 144,329,957
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
50 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 304 bp overlap
ASH2L 2 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 206 bp overlap
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 76 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 137 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 415 bp overlap
BACH2 1 dataset
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 168 bp overlap
BATF3 2 datasets
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 266 bp overlap
ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 255 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 65 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 163 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 113 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 203 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 110 bp overlap
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 250 bp overlap
BRD4 10 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 116 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 76 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 219 bp overlap
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 227 bp overlap
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 149 bp overlap
ChIP HCC1806_300nMJQ1_24h GSE87418.BRD4.HCC1806_300nMJQ1_24h 232 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 344 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 144 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 79 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 228 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 141 bp overlap
CREM 2 datasets
ChIP GM12878 ENCSR839XZU.CREM.GM12878 224 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 134 bp overlap
CTCF 1 dataset
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 101 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 208 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 302 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 185 bp overlap
ESR1 2 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 109 bp overlap
ChIP MCF-7 GSE103023.ESR1.MCF-7 154 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 98 bp overlap
FOS 1 dataset
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 128 bp overlap
FOXA1 1 dataset
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 209 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 415 bp overlap
ChIP DE DE-FOXA2-2 415 bp overlap
GATA2 1 dataset
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 112 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 415 bp overlap
ChIP DE DE-GATA4-2 415 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 230 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 271 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 415 bp overlap
ChIP DE DE-GATA6-2 415 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 415 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 138 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 99 bp overlap
ChIP HepG2 ENCFF854JLR 162 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCFF918AID 72 bp overlap
IRF4 2 datasets
ChIP B-cell GSE142493.IRF4.B-cell 415 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 415 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 303 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 273 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 127 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 213 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 185 bp overlap
JUND 1 dataset
ChIP K562 ENCFF830LVJ 270 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 71 bp overlap
MAF 1 dataset
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 236 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 209 bp overlap
MEF2B 2 datasets
ChIP DOHH2 GSE69558.MEF2B.DOHH2 175 bp overlap
ChIP tonsil GSE110682.MEF2B.tonsil 415 bp overlap
MEF2C 1 dataset
ChIP GM12878 ENCFF473ASZ 118 bp overlap
RAD21 1 dataset
ChIP lymphoblast GSE155324.RAD21.lymphoblast 158 bp overlap
RB1 1 dataset
ChIP MCF-7_siGFP GSE98728.RB1.MCF-7_siGFP 239 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 205 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 271 bp overlap
RELA 3 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 207 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 263 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 152 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 325 bp overlap
SMAD3 1 dataset
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 294 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 82 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 145 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 415 bp overlap
STAT3 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 119 bp overlap
TEAD4 3 datasets
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 250 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 415 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 154 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 395 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 319 bp overlap
ZEB2 3 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 294 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 189 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 238 bp overlap
ZNF384 3 datasets
ChIP GM12878 ENCFF229VSP 245 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 179 bp overlap
ChIP K562 ENCFF365NXQ 247 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 66 bp overlap