chr2 : 133,497,397 – 133,497,669
272 bp 62 TFs 0 linked genes
This 272 bp open chromatin element has no linked target genes and is bound by 62 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:133,492,397 – 133,502,669
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
AR 6 datasets
ChIP VCaP GSE148358.AR.VCaP 64 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 149 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 67 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 156 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 82 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 55 bp overlap
ASH2L 2 datasets
ChIP VCaP GSE60841.ASH2L.VCaP 216 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 272 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 155 bp overlap
BRD4 8 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 168 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 73 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 272 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 250 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 93 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 247 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 184 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 272 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 87 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 272 bp overlap
CLOCK 1 dataset
ChIP MCF-7 ENCFF642OGE 272 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 187 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 202 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 163 bp overlap
ERG 2 datasets
ChIP VCaP GSE49091.ERG.VCaP 178 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 123 bp overlap
ESR1 8 datasets
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 51 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 127 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 75 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 109 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 58 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 152 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 123 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 272 bp overlap
EZH2 4 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 272 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 272 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 123 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 218 bp overlap
EZH2_phosphoT487 1 dataset
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 272 bp overlap
FLI1 5 datasets
ChIP A-673 GSE99959.FLI1.A-673 119 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 75 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 135 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 167 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 92 bp overlap
FOXA1 9 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 113 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 123 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 67 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 74 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 214 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 127 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 138 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 161 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 224 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 117 bp overlap
ChIP DE DE-FOXA2-2 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 120 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 105 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 193 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 182 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 59 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 191 bp overlap
HOXB13 4 datasets
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 110 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 137 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 272 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 166 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 254 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 164 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 201 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 231 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 94 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 173 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 55 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 173 bp overlap
MED1 2 datasets
ChIP VCaP GSE148358.MED1.VCaP 250 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 265 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 272 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 272 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 163 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 154 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 143 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 235 bp overlap
NEUROG2 4 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 154 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 178 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 151 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 90 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 57 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 229 bp overlap
PGR 7 datasets
ChIP T-47D GSE31129.PGR.T-47D 71 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 181 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 152 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 228 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 170 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 145 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 102 bp overlap
POLR2A 2 datasets
ChIP PFSK-1 ENCFF576NIT 272 bp overlap
ChIP SK-N-MC ENCFF088IVG 257 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 255 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 170 bp overlap
RAD21 1 dataset
ChIP MCF-7 ERP000209.RAD21.MCF-7 117 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 135 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 260 bp overlap
REST 3 datasets
ChIP WA01 ENCSR000BHM.REST.WA01 198 bp overlap
ChIP neural ENCSR000BTV.REST.neural 260 bp overlap
ChIP neural cell ENCFF882LXX 272 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 272 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 197 bp overlap
SMARCA4 6 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 252 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 185 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 272 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 207 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 272 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 186 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 140 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 64 bp overlap
SMC1A-B 1 dataset
ChIP TC-32 GSE115250.SMC1A-B.TC-32 222 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 140 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 272 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 272 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 178 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 181 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 194 bp overlap
STAT3 1 dataset
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 130 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 226 bp overlap
TAF1 2 datasets
ChIP PFSK-1 ENCFF982LZL 75 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 156 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
TEAD4 5 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 57 bp overlap
ChIP H1 ENCFF778PAX 232 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 213 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 217 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 57 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 217 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 157 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 249 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 200 bp overlap
ZNF687 2 datasets
ChIP GM12878 ENCFF233SGE 155 bp overlap
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 272 bp overlap
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