chrX : 78,747,527 – 78,747,914

387 bp 65 TFs 1 linked gene

This 387 bp open chromatin element is linked to LPAR4 and is bound by 65 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
LPAR4		at TSS	At TSS	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

65 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 352 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 149 bp overlap

BRD2 1 dataset

ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 125 bp overlap

BRD4 4 datasets

ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 136 bp overlap

ChIP RH4 GSE83726.BRD4.RH4 332 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 230 bp overlap

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 306 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 321 bp overlap

CREB1 1 dataset

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 158 bp overlap

E2F1 1 dataset

ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 204 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 322 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 364 bp overlap

ERF::FOXI1 1 dataset

Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap

ETV2::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

ETV5::FOXI1 1 dataset

Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap

ETV5::FOXO1 1 dataset

Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap

EZH2 1 dataset

ChIP LNCaP GSE39459.EZH2.LNCaP 91 bp overlap

FLI1 1 dataset

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 60 bp overlap

FLI1::FOXI1 2 datasets

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

FOSL1::JUND 2 datasets

Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap

Motif ES_0h ES_0h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2 3 datasets

Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap

Motif ES_0h ES_0h-FOSL2_MA0478.2 10 bp overlap

ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 237 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 322 bp overlap

FOXA2 4 datasets

ChIP DE DE-FOXA2-1 387 bp overlap

ChIP DE DE-FOXA2-2 379 bp overlap

ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 187 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 233 bp overlap

FOXF1 1 dataset

ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 150 bp overlap

FOXJ2::ELF1 2 datasets

Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap

Motif ES_0h ES_0h-FOXJ2ELF1_MA1952.2 11 bp overlap

FOXL2 1 dataset

ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 251 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 143 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap

FOXO1::ELK3 2 datasets

Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap

FOXO1::FLI1 2 datasets

Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap

GCM2 1 dataset

Motif DE_12h DE_12h-GCM2_MA0767.2 8 bp overlap

HDAC2 3 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 223 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 340 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 164 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 283 bp overlap

HOXB13 2 datasets

Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap

Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap

KLF14 2 datasets

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap

KLF15 2 datasets

Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap

Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 191 bp overlap

MED1 1 dataset

ChIP U-87MG GSE36354.MED1.U-87MG 168 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 280 bp overlap

MYCN 1 dataset

ChIP RH4 GSE83726.MYCN.RH4 61 bp overlap

MYOG 1 dataset

ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 172 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 350 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 65 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 155 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 156 bp overlap

NFYB 2 datasets

Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap

Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 84 bp overlap

POU5F1 4 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 186 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 387 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 122 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 214 bp overlap

PRDM9 2 datasets

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap

Prdm5 2 datasets

Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap

Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap

RAD21 2 datasets

ChIP RH4 GSE83726.RAD21.RH4 161 bp overlap

ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 378 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 140 bp overlap

RFX5 2 datasets

Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap

Motif ES_0h ES_0h-RFX5_MA0510.3 14 bp overlap

SATB1 2 datasets

Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap

Motif ES_0h ES_0h-SATB1_MA1963.2 7 bp overlap

SMARCA4 8 datasets

ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 59 bp overlap

ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 183 bp overlap

ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 57 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 224 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 311 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 387 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 100 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 190 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 387 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 190 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 387 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 387 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 292 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 180 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 294 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 280 bp overlap

SP2 2 datasets

Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap

Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 183 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 387 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 365 bp overlap

TBP 5 datasets

ChIP H1 ENCFF859IIO 377 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 259 bp overlap

ChIP hESC GSE122298.TBP.hESC 271 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 155 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 162 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap

ZBTB6 1 dataset

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

ZBTB7B 1 dataset

Motif DE_12h DE_12h-ZBTB7B_MA0694.2 10 bp overlap

ZFP14 1 dataset

Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap

ZNF22 1 dataset

ChIP HEK293 GSE76494.ZNF22.HEK293 360 bp overlap

ZNF528 2 datasets

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap