chrX : 75,279,043 – 75,279,249
206 bp 72 TFs 1 linked gene
This 206 bp open chromatin element is linked to UPRT and is bound by 72 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
UPRT 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:75,274,043 – 75,284,249
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 107 bp overlap
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 171 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 206 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 206 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 206 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 178 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BCL11A 2 datasets
Motif ES_0h ES_0h-BCL11A_MA2324.1 7 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 84 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 156 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 54 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
EBF3 1 dataset
Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap
ESR1 12 datasets
ChIP MCF-7 GSE103023.ESR1.MCF-7 172 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 171 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 192 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 206 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 206 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 142 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 191 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 206 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 206 bp overlap
ChIP ZR751 GSE72249.ESR1.ZR751 206 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 206 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 206 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 129 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 51 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
FOXA1 28 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 206 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 170 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 167 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 191 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 156 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 141 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 206 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 185 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 150 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 170 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 206 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 206 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 206 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 187 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 127 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 206 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 176 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 206 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 206 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 206 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 206 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 206 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 206 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 206 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 206 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 92 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 136 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 176 bp overlap
FOXF1 1 dataset
ChIP GIST48 GSE106624.FOXF1.GIST48 206 bp overlap
GATA1 2 datasets
ChIP K-562 GSE107726.GATA1.K-562 161 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 129 bp overlap
GATA2 5 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 156 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 156 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 136 bp overlap
ChIP SH-SY5Y ENCFF485YIB 206 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 206 bp overlap
GATA3 7 datasets
ChIP MCF-7 ENCFF352QVM 206 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 206 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 206 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 177 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 206 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 206 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 206 bp overlap
GATA3_Cter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Cter.T-47D_CR3flp 192 bp overlap
GATA3_Nter 2 datasets
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 206 bp overlap
ChIP T-47D_flp-ctrl GSE99479.GATA3_Nter.T-47D_flp-ctrl 190 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 206 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 206 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB13 1 dataset
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 103 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 206 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 206 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
MBD3 1 dataset
ChIP HEK293T GSE102945.MBD3.HEK293T 167 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 206 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 206 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 200 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
NR1H4::RXRA 1 dataset
Motif ES_0h ES_0h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2F1 1 dataset
Motif ES_0h ES_0h-NR2F1_MA1538.1 15 bp overlap
NR2F6 1 dataset
Motif ES_0h ES_0h-NR2F6_MA1539.1 15 bp overlap
NR4A2::RXRA 1 dataset
Motif ES_0h ES_0h-NR4A2RXRA_MA1147.2 13 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 187 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 183 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 206 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 184 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 206 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 202 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 206 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 178 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 124 bp overlap
Runx1 1 dataset
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 177 bp overlap
SIX1 1 dataset
Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap
SMAD2 2 datasets
ChIP hESC GSE29422.SMAD2.hESC 173 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 206 bp overlap
SMARCA4 4 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 171 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 200 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 198 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 206 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 206 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 206 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 206 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 88 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 181 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 186 bp overlap
Six4 1 dataset
Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 195 bp overlap
TBP 1 dataset
ChIP hESC_10h GSE122298.TBP.hESC_10h 110 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 206 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 167 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 174 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 190 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 191 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 127 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 152 bp overlap
Zic1::Zic2 1 dataset
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap
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