chr2 : 21,633,397 21,633,854
457 bp 65 TFs 0 linked genes
This 457 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:21,628,397 – 21,638,854
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AR 14 datasets
ChIP 22Rv1 GSE96652.AR.22Rv1 326 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 202 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 190 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 236 bp overlap
ChIP MDA-MB-453 ERP001226.AR.MDA-MB-453 255 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 194 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 155 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 155 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 61 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 115 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 178 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 169 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 129 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 85 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 266 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 341 bp overlap
BRD4 10 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 196 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 308 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 306 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 237 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 74 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 265 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 224 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 189 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 235 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CDK9 1 dataset
ChIP Kelly_CYC065 GSE107126.CDK9.Kelly_CYC065 457 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 457 bp overlap
CTCF 3 datasets
ChIP BE2C ENCFF757SRF 317 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 196 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 457 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 416 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 457 bp overlap
ERG 1 dataset
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 73 bp overlap
ESR1 2 datasets
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 302 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 307 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 365 bp overlap
FOXA1 20 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 420 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 272 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 457 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 293 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 320 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 201 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 266 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 216 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 457 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 282 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 268 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 420 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 417 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 433 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 386 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 370 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 382 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 271 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 126 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 159 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 300 bp overlap
ChIP DE DE-FOXA2-2 228 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 368 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 349 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 457 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 457 bp overlap
GLIS3 2 datasets
ChIP SK-N-SH ENCFF370MHZ 285 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 278 bp overlap
HAND2 4 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 457 bp overlap
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 183 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 457 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 198 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HNF4G 1 dataset
ChIP 22Rv1_Dox GSE85558.HNF4G.22Rv1_Dox 175 bp overlap
HOXB13 2 datasets
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 228 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 117 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 411 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0_SHLSD18A GSE58258.KDM1A.SH-SY5Y_B0_SHLSD18A 176 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 270 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MAML3 1 dataset
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 207 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 129 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 341 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 204 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 332 bp overlap
MYCN 10 datasets
ChIP BE2C GSE80151.MYCN.BE2C 388 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 334 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 457 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 133 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 293 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 389 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 457 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 138 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 388 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 276 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 457 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 457 bp overlap
POU5F1 1 dataset
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
RAD21 5 datasets
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 105 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 303 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 399 bp overlap
ChIP neural cell ENCFF564MOT 258 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 211 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 170 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 457 bp overlap
REST 2 datasets
ChIP SK-N-SH ENCFF861MKH 245 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 103 bp overlap
RFX7 1 dataset
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 457 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 158 bp overlap
SMC3 3 datasets
ChIP SK-N-SH ENCFF791WFB 241 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 116 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 387 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 185 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 235 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
STAT1 1 dataset
ChIP HeLa-S3 ENCSR000EZK.STAT1.HeLa-S3 312 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 345 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 321 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 300 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 194 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 194 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 156 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 154 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 436 bp overlap
TFAP2C 4 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 258 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 276 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 193 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 381 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 409 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 409 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF417 1 dataset
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 297 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap