chr20 : 11,766,936 11,767,266
330 bp 59 TFs 0 linked genes
This 330 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:11,761,936 – 11,772,266
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AR 2 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 138 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 153 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 140 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 103 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 184 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 262 bp overlap
BRD4 5 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 119 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 198 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 152 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 315 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 312 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 205 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 220 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCFF432ZEW 268 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 180 bp overlap
ChIP H1 ENCFF955PMP 291 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 199 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 103 bp overlap
E2F8 1 dataset
Motif ES_0h ES_0h-E2F8_MA0865.3 9 bp overlap
ELF1 1 dataset
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
EP300 2 datasets
ChIP gastroesophageal sphincter ENCFF211FPL 145 bp overlap
ChIP neural cell ENCFF442QNK 330 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 267 bp overlap
FERD3L 1 dataset
Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 293 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 200 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 165 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 330 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 330 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 222 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 299 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 330 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 211 bp overlap
JUND 2 datasets
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 73 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 156 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 159 bp overlap
MAFK 1 dataset
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 198 bp overlap
MED1 6 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 330 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 161 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 271 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 171 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 285 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 161 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 73 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 246 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 204 bp overlap
Mafg 1 dataset
Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap
NANOG 9 datasets
ChIP H1 ENCFF747ZPQ 238 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 330 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 330 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 202 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 330 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 330 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 330 bp overlap
ChIP hESC GSE20650.NANOG.hESC 330 bp overlap
ChIP hESC GSE18292.NANOG.hESC 101 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 145 bp overlap
Nfe2l2 1 dataset
Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 255 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 155 bp overlap
POLR2A 2 datasets
ChIP gastroesophageal sphincter ENCFF070PCA 206 bp overlap
ChIP neural cell ENCFF604SPB 270 bp overlap
POU5F1 5 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 330 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 330 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 165 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 330 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 330 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 310 bp overlap
RAD21 2 datasets
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 99 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 190 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 255 bp overlap
ChIP neural cell ENCFF882LXX 223 bp overlap
RFX5 6 datasets
ChIP H1 ENCFF605EGG 303 bp overlap
ChIP IMR-90 ENCFF886KPO 273 bp overlap
ChIP IMR-90 ENCSR000EFD.RFX5.IMR-90 264 bp overlap
ChIP MCF-7 ENCFF983ILY 310 bp overlap
ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 267 bp overlap
ChIP WA01 ENCSR000ECF.RFX5.WA01 245 bp overlap
RNF2 1 dataset
ChIP WA01 GSE104690.RNF2.WA01 204 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 224 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 180 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 180 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 330 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 199 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 274 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 200 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 176 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 229 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 242 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 239 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 330 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 212 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 189 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 244 bp overlap
TP53 2 datasets
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 228 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 270 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF184 1 dataset
Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap