chr19 : 57,804,773 57,805,214
441 bp 37 TFs 20 linked genes
This 441 bp open chromatin element is linked to 20 target genes and is bound by 37 transcription factors.
Linked Genes
20 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
ZNF552 9.7 kb Proximal Proximity
ZNF587B 14.7 kb Distal Multiome
ZNF586 35.4 kb Distal Multiome
ZNF587 44.8 kb Distal Multiome
ZNF776 58.2 kb Distal Multiome
ZNF814 84.0 kb Distal Multiome
ZNF154 95.9 kb Distal Multiome
ZNF417 111.5 kb Distal Multiome
ZNF551 123.1 kb Distal Multiome
ZNF418 130.3 kb Distal Multiome
ZNF256 142.6 kb Distal Multiome
ZNF211 171.9 kb Distal Multiome
ZNF134 190.8 kb Distal Multiome
ZNF606 197.7 kb Distal Multiome
ZNF530 205.2 kb Distal Multiome
ZIK1 221.5 kb Distal Multiome
ZNF550 245.2 kb Distal Multiome
ZNF135 254.2 kb Distal Multiome
ZNF549 277.6 kb Distal Multiome
ZSCAN18 293.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:57,799,773 – 57,810,214
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 10 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 320 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 218 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 159 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 226 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 441 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 212 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 133 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 98 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 64 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 178 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 144 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 237 bp overlap
BRD4 2 datasets
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 196 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 271 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 273 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 421 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 113 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 180 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 156 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 221 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 174 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 130 bp overlap
ESR1 8 datasets
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 254 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 323 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 229 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 259 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 326 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 311 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 254 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 244 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 275 bp overlap
ChIP WTC11 ENCFF812SCD 367 bp overlap
FOXA1 3 datasets
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 158 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 259 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 80 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 137 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 361 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 359 bp overlap
HOXB13 6 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 158 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 134 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 148 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 154 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 240 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 228 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 181 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 441 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 441 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 278 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 268 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 216 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 261 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 117 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 137 bp overlap
MAX 4 datasets
ChIP H1 ENCFF914VQY 118 bp overlap
ChIP Ishikawa ENCFF064TDQ 186 bp overlap
ChIP Ishikawa ENCFF064TDQ 441 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 151 bp overlap
MYC 1 dataset
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 96 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 215 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 285 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 280 bp overlap
NR3C1 3 datasets
ChIP HCC1937 GSE152203.NR3C1.HCC1937 217 bp overlap
ChIP MCF-10A_DEX_60min GSE102355.NR3C1.MCF-10A_DEX_60min 145 bp overlap
ChIP MCF-10A_EGF_DEX_20min GSE102355.NR3C1.MCF-10A_EGF_DEX_20min 153 bp overlap
POLR2A 13 datasets
ChIP GM23338 ENCFF450WCS 441 bp overlap
ChIP body of pancreas ENCFF501FEC 441 bp overlap
ChIP breast epithelium ENCFF045XXN 120 bp overlap
ChIP breast epithelium ENCFF955FMX 396 bp overlap
ChIP prostate gland ENCFF545MVF 301 bp overlap
ChIP prostate gland ENCFF832RQK 316 bp overlap
ChIP prostate gland ENCFF881OMH 232 bp overlap
ChIP prostate gland ENCFF882MXU 274 bp overlap
ChIP stomach ENCFF820WZN 151 bp overlap
ChIP transverse colon ENCFF193UMS 380 bp overlap
ChIP transverse colon ENCFF610RWV 164 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 441 bp overlap
ChIP vagina ENCFF305NWS 343 bp overlap
RELA 1 dataset
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 219 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 329 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 337 bp overlap
SOX9 1 dataset
ChIP HT29 GSE63629.SOX9.HT29 143 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 145 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 441 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 244 bp overlap
TEAD1 2 datasets
ChIP WTC11 ENCFF502QUV 388 bp overlap
ChIP WTC11 ENCFF502QUV 184 bp overlap
TP63 1 dataset
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 149 bp overlap
YY1 1 dataset
ChIP H1 ENCFF524BTL 337 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 441 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 282 bp overlap