chr18 : 59,267,802 – 59,267,997
195 bp 59 TFs 1 linked gene
This 195 bp open chromatin element is linked to RAX and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RAX 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:59,262,802 – 59,272,997
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 87 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 191 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 155 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 195 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 195 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 195 bp overlap
BRD4 2 datasets
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 164 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 195 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 195 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 179 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 195 bp overlap
CTCF 31 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 154 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 93 bp overlap
ChIP H1 ENCFF764RHO 194 bp overlap
ChIP HEK293 ENCFF498RMM 132 bp overlap
ChIP HEK293 ENCFF821TIC 195 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 195 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 74 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 70 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 95 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 95 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 78 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 187 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 195 bp overlap
ChIP RWPE2 ENCFF911IEE 195 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 195 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 106 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 144 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 100 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 188 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 195 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 143 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 92 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 95 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 114 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 120 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 65 bp overlap
ChIP keratinocyte ENCFF046PBT 125 bp overlap
ChIP keratinocyte ENCFF291YDC 125 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 195 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 143 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 79 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 195 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 195 bp overlap
ChIP BLaER1 ENCFF093OYK 176 bp overlap
ChIP BLaER1 ENCFF460KDD 117 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 85 bp overlap
EZH2 25 datasets
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 195 bp overlap
ChIP GM23248 ENCFF404ZHM 195 bp overlap
ChIP GM23248 ENCFF404ZHM 195 bp overlap
ChIP GM23248 ENCFF506FWX 195 bp overlap
ChIP GM23338 ENCFF613YON 195 bp overlap
ChIP H1 ENCFF232NZA 195 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 179 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 195 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 195 bp overlap
ChIP HepG2 ENCFF912EIW 195 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 180 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 195 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 195 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 195 bp overlap
ChIP astrocyte ENCFF365JTP 195 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 195 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 195 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 195 bp overlap
ChIP hESC GSE113817.EZH2.hESC 193 bp overlap
ChIP hepatocyte ENCFF118DKH 186 bp overlap
ChIP hepatocyte ENCFF552DZB 195 bp overlap
ChIP keratinocyte ENCFF070STK 195 bp overlap
ChIP keratinocyte ENCFF070STK 195 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 136 bp overlap
ChIP neural progenitor cell ENCFF472NFV 195 bp overlap
EZH2_phosphoT487 1 dataset
ChIP GM23338 ENCSR591DTH.EZH2_phosphoT487.GM23338 88 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 136 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 129 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 193 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 131 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE107730.INO80.Hep-G2 182 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 195 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 188 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 195 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 125 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 195 bp overlap
KLF10 1 dataset
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF7 1 dataset
Motif ES_0h ES_0h-KLF7_MA1959.2 8 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 136 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 184 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 195 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 118 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCFF016MNJ 195 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 195 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 195 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 195 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 195 bp overlap
RAD21 6 datasets
ChIP H1 ENCFF698EWO 173 bp overlap
ChIP H1 ENCFF967OJF 123 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 195 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 195 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 192 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 75 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 111 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 166 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 195 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 71 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 155 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 151 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 104 bp overlap
SMARCA4 3 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 195 bp overlap
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 127 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 190 bp overlap
SP1 1 dataset
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SRSF3 1 dataset
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 166 bp overlap
SS18 3 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 195 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 121 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 162 bp overlap
SUZ12 4 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 185 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 147 bp overlap
ChIP H1 ENCFF881NFR 195 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 103 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 195 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 195 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 183 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 170 bp overlap
ZBTB24 1 dataset
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 195 bp overlap
ChIP HEK293 ENCFF752TCU 195 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 195 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 195 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 195 bp overlap
ZBTB6 2 datasets
ChIP HEK293 ENCFF881ECZ 195 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 164 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 195 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 195 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 195 bp overlap
ZNF136 1 dataset
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 195 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 137 bp overlap
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