Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

AR 1 dataset

ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 85 bp overlap

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 313 bp overlap

BCOR 1 dataset

ChIP K-562 ENCSR808AKZ.BCOR.K-562 203 bp overlap

BORCS8-MEF2B,MEF2B 1 dataset

ChIP GM12878 ENCFF427QAI 418 bp overlap

BRD4 4 datasets

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 57 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 69 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 385 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 527 bp overlap

CDK9 3 datasets

ChIP BT-474 ERP010664.CDK9.BT-474 168 bp overlap

ChIP BT-474 ERP010664.CDK9.BT-474 114 bp overlap

ChIP BT-474_INHHDAC ERP010664.CDK9.BT-474_INHHDAC 612 bp overlap

DEK 1 dataset

ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 277 bp overlap

EBF1 2 datasets

ChIP GM12878 ENCFF167CZS 294 bp overlap

ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 204 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 202 bp overlap

EP300 1 dataset

ChIP osteoblast ENCSR000AUD.EP300.osteoblast 587 bp overlap

ESR1 1 dataset

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 167 bp overlap

ESRRA 1 dataset

ChIP BT-474 GSE81651.ESRRA.BT-474 379 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 332 bp overlap

EZH2 7 datasets

ChIP DND41 ENCSR000ASW.EZH2.DND41 326 bp overlap

ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 176 bp overlap

ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 250 bp overlap

ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 78 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 91 bp overlap

ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 462 bp overlap

ChIP SU-DHL-6_DMSO GSE134136.EZH2.SU-DHL-6_DMSO 333 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 336 bp overlap

ChIP DE DE-FOXA2-2 264 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-2 328 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 271 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 385 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 330 bp overlap

GLIS1 3 datasets

ChIP HEK293 ENCFF299RSE 177 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 290 bp overlap

ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 182 bp overlap

GLIS2 2 datasets

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 137 bp overlap

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 156 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 617 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 137 bp overlap

JUN 2 datasets

ChIP 786-O GSE86092.JUN.786-O 255 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 281 bp overlap

KDM1A 4 datasets

ChIP H1 ENCFF696SGD 184 bp overlap

ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 144 bp overlap

ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 195 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 257 bp overlap

MEF2B 1 dataset

ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 343 bp overlap

MTA1 1 dataset

ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 61 bp overlap

NELFE 1 dataset

ChIP K-562_HS GSE112379.NELFE.K-562_HS 123 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 411 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 196 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 488 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 383 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 355 bp overlap

PCBP2 1 dataset

ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 224 bp overlap

PRDM14 1 dataset

ChIP NCCIT GSE71675.PRDM14.NCCIT 275 bp overlap

PTBP1 2 datasets

ChIP K-562 GSE120104.PTBP1.K-562 168 bp overlap

ChIP K-562 ENCSR948KMB.PTBP1.K-562 159 bp overlap

SIX2 2 datasets

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 102 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 214 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 617 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 617 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 617 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 475 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 610 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 617 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 617 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 617 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 167 bp overlap

SMC3 1 dataset

ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 64 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 617 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 193 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 184 bp overlap

ZIC2 2 datasets

ChIP HEK293 ENCFF033NQQ 148 bp overlap

ChIP HEK293 ENCFF033NQQ 425 bp overlap

ZMYM3 4 datasets

ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 155 bp overlap

ChIP K-562 ENCSR102KIN.ZMYM3.K-562 200 bp overlap

ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 236 bp overlap

ChIP K562 ENCFF361LXT 261 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 195 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 59 bp overlap

ZNF608 1 dataset

ChIP HepG2 ENCFF713QUJ 547 bp overlap

ZNF92 1 dataset

ChIP retina_pigment GSE60024.ZNF92.retina_pigment 166 bp overlap

Gene	Dist. to TSS	Distance	Link type
SPATA20	39.6 kb	Distal	Multiome
RSAD1	107.9 kb	Distal	Multiome
ANKRD40	120.9 kb	Distal	Multiome
LUC7L3	132.8 kb	Distal	Multiome
ACSF2	160.6 kb	Distal	Multiome
LRRC59	189.3 kb	Distal	Multiome
EME1	213.6 kb	Distal	Multiome
MRPL27	213.6 kb	Distal	Multiome
XYLT2	240.7 kb	Distal	Multiome
TOB1	279.6 kb	Distal	Multiome

Genome Browser