chr15 : 97,126,676 97,127,465
789 bp 73 TFs 0 linked genes
This 789 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:97,121,676 – 97,132,465
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 513 bp overlap
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD2 4 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 129 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 399 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 113 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 345 bp overlap
BRD4 2 datasets
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 371 bp overlap
ChIP HeLa GSE51633.BRD4.HeLa 301 bp overlap
CDK6 2 datasets
ChIP KB_IL GSE52469.CDK6.KB_IL 214 bp overlap
ChIP KB_IL GSE52469.CDK6.KB_IL 168 bp overlap
CDX1 2 datasets
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CEBPB 1 dataset
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 244 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 193 bp overlap
CTCF 81 datasets
ChIP 22Rv1 ENCFF466OXN 440 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 225 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 265 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 240 bp overlap
ChIP A673 ENCFF123WOM 280 bp overlap
ChIP A673 ENCFF123WOM 441 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 131 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 235 bp overlap
ChIP GM23338 ENCFF531QOI 278 bp overlap
ChIP GM23338 ENCFF772DML 178 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 305 bp overlap
ChIP H1 ENCFF764RHO 240 bp overlap
ChIP H9 ENCFF152GTF 239 bp overlap
ChIP HEK293 ENCFF498RMM 240 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 304 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 192 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 138 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 274 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 196 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 139 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 196 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 144 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 246 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 202 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 106 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 138 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 170 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 167 bp overlap
ChIP MCF-7 ENCFF139NQI 207 bp overlap
ChIP MCF-7 ENCFF198DQX 203 bp overlap
ChIP MCF-7 ENCFF210JUZ 302 bp overlap
ChIP MCF-7 ENCFF494VXA 203 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 326 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 194 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 205 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 147 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 96 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 306 bp overlap
ChIP RWPE2 ENCFF911IEE 446 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 166 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 142 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 180 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 209 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 329 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 206 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 154 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 224 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 210 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 184 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 190 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 187 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 225 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 185 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 245 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 204 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 158 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 206 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 213 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 215 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 214 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 169 bp overlap
ChIP endodermal cell ENCFF471YCZ 228 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 188 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 165 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 289 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 124 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 160 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 146 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 383 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 138 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 237 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 151 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 240 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 291 bp overlap
ChIP neural progenitor cell ENCFF420RBO 178 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 277 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 212 bp overlap
CTCFL 3 datasets
ChIP FT282 GSE131931.CTCFL.FT282 259 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 175 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 337 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
ERF::NHLH1 2 datasets
Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap
Motif ES_0h ES_0h-ERFNHLH1_MA1938.2 16 bp overlap
ESR1 4 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 150 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 168 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 153 bp overlap
ChIP breast_tumor_Male_3 GSE104399.ESR1.breast_tumor_Male_3 461 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 248 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FOS 1 dataset
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 216 bp overlap
FOSL1 4 datasets
ChIP BT-549 GSE46166.FOSL1.BT-549 89 bp overlap
ChIP BT-549 GSE46166.FOSL1.BT-549 303 bp overlap
ChIP BT-549 GSE112961.FOSL1.BT-549 361 bp overlap
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
ChIP hESC GSE69539.FOSL2.hESC 187 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 167 bp overlap
GRHL2 1 dataset
ChIP PEO1 GSE71018.GRHL2.PEO1 180 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 193 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 187 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 228 bp overlap
HOXB9 2 datasets
Motif DE_12h DE_12h-HOXB9_MA1503.2 9 bp overlap
Motif ES_0h ES_0h-HOXB9_MA1503.2 9 bp overlap
HOXC11 2 datasets
Motif DE_12h DE_12h-HOXC11_MA0651.3 11 bp overlap
Motif ES_0h ES_0h-HOXC11_MA0651.3 11 bp overlap
HOXC12 2 datasets
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
Motif ES_0h ES_0h-HOXC12_MA0906.2 10 bp overlap
HOXC9 2 datasets
Motif DE_12h DE_12h-HOXC9_MA0485.3 9 bp overlap
Motif ES_0h ES_0h-HOXC9_MA0485.3 9 bp overlap
HOXD10 2 datasets
Motif DE_12h DE_12h-HOXD10_MA1506.2 10 bp overlap
Motif ES_0h ES_0h-HOXD10_MA1506.2 10 bp overlap
HOXD12 2 datasets
Motif DE_12h DE_12h-HOXD12_MA0873.2 10 bp overlap
Motif ES_0h ES_0h-HOXD12_MA0873.2 10 bp overlap
JUN 2 datasets
ChIP BT-549 GSE46166.JUN.BT-549 63 bp overlap
ChIP BT-549_TNF GSE71976.JUN.BT-549_TNF 94 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 269 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 393 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 338 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 110 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 52 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 142 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 145 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 177 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 388 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 197 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 209 bp overlap
RELA 6 datasets
ChIP 786-O GSE86092.RELA.786-O 507 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 363 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 306 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 285 bp overlap
ChIP KB GSE52469.RELA.KB 161 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 280 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 374 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 221 bp overlap
SMAD3 2 datasets
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 207 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 249 bp overlap
SMARCA4 1 dataset
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 241 bp overlap
SMARCB1 3 datasets
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 230 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 301 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 399 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 98 bp overlap
SP8 1 dataset
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
STAG1 3 datasets
ChIP HeLa GSE126990.STAG1.HeLa 284 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 284 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 108 bp overlap
TEAD4 2 datasets
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 268 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 155 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 211 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 5 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 218 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 286 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 318 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 310 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
ZFX 3 datasets
ChIP HCT-116 GSE102616.ZFX.HCT-116 295 bp overlap
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 296 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 258 bp overlap
ZNF384 2 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap