chr15 : 48,806,231 – 48,806,578
347 bp 67 TFs 2 linked genes
This 347 bp open chromatin element is linked to ENSG00000259700 and CEP152 and is bound by 67 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000259700 4.1 kb Proximal Proximity
CEP152 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:48,801,231 – 48,811,578
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 217 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 323 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 247 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 270 bp overlap
BRD4 1 dataset
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 109 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 262 bp overlap
CTNNB1 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 347 bp overlap
EBF1 8 datasets
ChIP ASC GSE54889.EBF1.ASC 177 bp overlap
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
ChIP GM12878 ENCFF167CZS 146 bp overlap
ChIP GM12878 ENCFF813OXE 189 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 220 bp overlap
ChIP LCL GSE75503.EBF1.LCL 298 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 214 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 286 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 260 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 339 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 155 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 126 bp overlap
ETV1 2 datasets
ChIP GIST GSE22441.ETV1.GIST 130 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 185 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FLI1 7 datasets
ChIP A-673 GSE99959.FLI1.A-673 290 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 280 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 262 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 183 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 311 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 323 bp overlap
ChIP SEM GSE117864.FLI1.SEM 170 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 1 dataset
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 191 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 129 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 88 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 241 bp overlap
HDAC2 1 dataset
ChIP pre-B-cell GSE107886.HDAC2.pre-B-cell 194 bp overlap
IKZF1 5 datasets
ChIP BCR-ABL1 GSE58825.IKZF1.BCR-ABL1 201 bp overlap
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 189 bp overlap
ChIP GM12878 ENCFF753XDO 347 bp overlap
ChIP GM12878 ENCFF824TGK 347 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 347 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF918AID 347 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 230 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 245 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 175 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 205 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 153 bp overlap
ChIP NB4 GSE63484.JMJD1C.NB4 128 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 338 bp overlap
KMT2A 5 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 286 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 347 bp overlap
ChIP L826 GSE83671.KMT2A.L826 273 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 347 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 347 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 312 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 347 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 266 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 197 bp overlap
MYB 2 datasets
ChIP SEM GSE117864.MYB.SEM 163 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 129 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 295 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 169 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 347 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 347 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 220 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 347 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 347 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 347 bp overlap
ChIP hESC GSE18292.NANOG.hESC 137 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 287 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 331 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 230 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 340 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 347 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 235 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 202 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 83 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 343 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 266 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 266 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 111 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 252 bp overlap
REST 3 datasets
ChIP PFSK-1 ENCFF845VHA 271 bp overlap
ChIP PFSK-1 ENCFF845VHA 198 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 139 bp overlap
RUNX1 5 datasets
ChIP 697 GSE138031.RUNX1.697 205 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 149 bp overlap
ChIP MV4-11 GSE79899.RUNX1.MV4-11 166 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 194 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 184 bp overlap
SIN3A 2 datasets
ChIP PFSK-1 ENCFF218MAY 251 bp overlap
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 124 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 345 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 151 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 207 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 252 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 270 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 347 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 209 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 272 bp overlap
SMC1A-B 1 dataset
ChIP TC-32 GSE115250.SMC1A-B.TC-32 198 bp overlap
SOX2 1 dataset
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 347 bp overlap
SPI1 2 datasets
ChIP HL-60 ENCFF645GBT 154 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 113 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 347 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 240 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 132 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 130 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 228 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 314 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 178 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 347 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 131 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 177 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 106 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
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