chr15 : 26,774,016 – 26,774,240
224 bp 41 TFs 1 linked gene
This 224 bp open chromatin element is linked to GABRB3 and is bound by 41 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
GABRB3 959 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:26,769,016 – 26,779,240
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
ARID4B 1 dataset
ChIP WTC11 ENCFF441HDK 224 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 224 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 224 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 224 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 89 bp overlap
BRD4 3 datasets
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 216 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 176 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 224 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 220 bp overlap
EHMT2 1 dataset
ChIP A-549 ENCSR321BJQ.EHMT2.A-549 138 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 145 bp overlap
EZH2 11 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 95 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 139 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 224 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 52 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 198 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 224 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 224 bp overlap
ChIP hepatocyte ENCFF552DZB 224 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 224 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 224 bp overlap
ChIP neural progenitor cell ENCFF472NFV 224 bp overlap
EZH2_phosphoT487 1 dataset
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 136 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 130 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-2 212 bp overlap
ChIP foregut GSE117136.GATA4.foregut 145 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 220 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 202 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 141 bp overlap
ChIP DE DE-GATA6-2 189 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 167 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 167 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 149 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 216 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 224 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 224 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 224 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 175 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 83 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 151 bp overlap
MXI1 2 datasets
ChIP H1 ENCFF963FZS 224 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 189 bp overlap
MYC 2 datasets
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 118 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 104 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 109 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 224 bp overlap
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 199 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 162 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 223 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 224 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 166 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 163 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 150 bp overlap
REST 41 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 224 bp overlap
ChIP A-549 ENCSR892DRK.REST.A-549 224 bp overlap
ChIP A549 ENCFF148AIS 224 bp overlap
ChIP GM23338 ENCFF024TCL 201 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 224 bp overlap
ChIP H1 ENCFF203SWY 224 bp overlap
ChIP H1 ENCFF203SWY 162 bp overlap
ChIP H1 ENCFF429RUE 224 bp overlap
ChIP HEK293 ENCFF073DOT 195 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 224 bp overlap
ChIP HL-60 ENCFF589LOF 169 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 224 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 224 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 214 bp overlap
ChIP HepG2 ENCFF122AWR 146 bp overlap
ChIP HepG2 ENCFF800JSL 218 bp overlap
ChIP Ishikawa ENCFF456OHV 211 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 224 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 224 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 207 bp overlap
ChIP K562 ENCFF430APM 224 bp overlap
ChIP MCF-7 ENCFF893RRD 180 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 224 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 219 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 224 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 101 bp overlap
ChIP PFSK-1 ENCFF845VHA 224 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 224 bp overlap
ChIP SK-N-SH ENCFF635KBN 224 bp overlap
ChIP SK-N-SH ENCFF861MKH 224 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 184 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 224 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 224 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 224 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 187 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 196 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 224 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 195 bp overlap
ChIP liver ENCFF577AZT 224 bp overlap
ChIP liver ENCSR867WPH.REST.liver 224 bp overlap
ChIP liver ENCSR893QWP.REST.liver 218 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 197 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 224 bp overlap
SIN3A 6 datasets
ChIP A549 ENCFF752ATT 224 bp overlap
ChIP H1 ENCFF042ZSL 224 bp overlap
ChIP H1 ENCFF896IJG 95 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 224 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 224 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 172 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 207 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 168 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 209 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 195 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 198 bp overlap
TAF1 1 dataset
ChIP neural cell ENCFF468SPD 224 bp overlap
TEAD1 3 datasets
ChIP WTC11 ENCFF502QUV 224 bp overlap
ChIP WTC11 ENCFF502QUV 143 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 162 bp overlap
TEAD4 2 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 138 bp overlap
ChIP H1 ENCFF778PAX 202 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 224 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 138 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 224 bp overlap
USP7 1 dataset
ChIP HEK293T GSE61048.USP7.HEK293T 120 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 168 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 224 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 151 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 224 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 224 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 146 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 143 bp overlap
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