chr14 : 89,625,899 89,626,322
423 bp 56 TFs 1 linked gene
This 423 bp open chromatin element is linked to FOXN3 and is bound by 56 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FOXN3 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:89,620,899 – 89,631,322
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
56 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 61 bp overlap
BRD4 8 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 224 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 418 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 310 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 423 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 111 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 176 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 180 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 246 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 423 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 196 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 396 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 178 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 70 bp overlap
GATA2 4 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 136 bp overlap
ChIP SH-SY5Y ENCFF485YIB 136 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 324 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 148 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 278 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 321 bp overlap
ChIP DE DE-GATA4-2 423 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 200 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 352 bp overlap
ChIP DE DE-GATA6-2 360 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 423 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 423 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 423 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 423 bp overlap
HDAC2 2 datasets
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 291 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 58 bp overlap
HNF4A 1 dataset
ChIP HepG2 ENCFF146SSF 81 bp overlap
KDM1A 2 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 62 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 194 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 57 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 108 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 272 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 145 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 216 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 86 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 327 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 254 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 274 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 255 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 318 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 178 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 177 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 162 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 55 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 106 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 331 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 423 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 64 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 157 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 99 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 105 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE76181.RUNX1.Jurkat 165 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 152 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 74 bp overlap
TAL1 3 datasets
ChIP CD34 GSE52924.TAL1.CD34 122 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 222 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 220 bp overlap
TBX21 3 datasets
ChIP GM12878 ENCFF951HUW 151 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 61 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 67 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 282 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 162 bp overlap
TP63 3 datasets
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 241 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 268 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 226 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 100 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 329 bp overlap
YY2 1 dataset
ChIP HEK293 ENCSR692HSE.YY2.HEK293 157 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 103 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 158 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 172 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 249 bp overlap
ZNF417 1 dataset
ChIP HEK293T GSE78099.ZNF417.HEK293T 397 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 84 bp overlap